RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
SDCBP2-206ENST00000615838 AS3MTQ9HBK9 375 aa20.37■□□□□ 0.85
SDCBP2-206ENST00000615838 TCRBV5S4A2TA0A5A2 114 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 ATP5JP18859 108 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 PRMT2P55345 433 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 FCGRTP55899 365 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 MTMR2Q13614 643 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 WDR18Q9BV38 432 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 ZBTB21Q9ULJ3 1066 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 CEP290O15078 2479 aa20.36■□□□□ 0.85
SDCBP2-206ENST00000615838 MYPNQ86TC9 1320 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 HOXD10P28358 340 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 SLFNL1Q499Z3 407 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 SH3D19Q5HYK7 790 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 ANKRD13CQ8N6S4 541 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 HAUS7Q99871 368 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 PNMA3Q9UL41 463 aa20.35■□□□□ 0.85
SDCBP2-206ENST00000615838 EN2P19622 333 aaPredicted RBP20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 BACE1P56817 501 aa20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 PRKCZQ05513 592 aa20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 RAET1EQ8TD07 263 aa20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 TMEM106CQ9BVX2 250 aa20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 CRNKL1Q9BZJ0 848 aaKnown RBP20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 EHD4Q9H223 541 aa20.34■□□□□ 0.85
SDCBP2-206ENST00000615838 GH2P01242 217 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 PLCD1P51178 756 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 LCORLQ8N3X6 602 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 ASCC2Q9H1I8 757 aaPredicted RBP20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 GINM1Q9NU53 330 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 GABRQQ9UN88 632 aa20.33■□□□□ 0.85
SDCBP2-206ENST00000615838 POLR3DP05423 398 aaPredicted RBP20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 ADD2P35612 726 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 EVX2Q03828 476 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 PABPC4Q13310 644 aaKnown RBP eCLIP20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 TATDN1Q6P1N9 297 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 SDR42E1Q8WUS8 393 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
SDCBP2-206ENST00000615838 USP17L10C9JJH3 530 aa20.31■□□□□ 0.84
SDCBP2-206ENST00000615838 CHGBP05060 677 aa20.31■□□□□ 0.84
SDCBP2-206ENST00000615838 GRK4P32298 578 aa20.31■□□□□ 0.84
SDCBP2-206ENST00000615838 MCM9Q9NXL9 1143 aa20.31■□□□□ 0.84
SDCBP2-206ENST00000615838 PLXNB2O15031 1838 aa20.31■□□□□ 0.84
SDCBP2-206ENST00000615838 C19orf81C9J6K1 198 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 TNPO2O14787 897 aaKnown RBP20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 MBD4O95243 580 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 SHMT1P34896 483 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 MTFR1Q15390 333 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 FAM110CQ1W6H9 321 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 CERKLQ49MI3 558 aaPredicted RBP20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
SDCBP2-206ENST00000615838 PRKAB2O43741 272 aa20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 RAB3GAP1Q15042 981 aa20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
SDCBP2-206ENST00000615838 CYP2D6P10635 497 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 FLT3LGP49771 235 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 ZYXQ15942 572 aaKnown RBP20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 ABCB5Q2M3G0 1257 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 EMILIN3Q9NT22 766 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
SDCBP2-206ENST00000615838 PEX10O60683 326 aa20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 HOXA7P31268 230 aaPredicted RBP20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 GABPAQ06546 454 aa20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 USP17L2Q6R6M4 530 aa20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 FEZ1Q99689 392 aa20.27■□□□□ 0.84
SDCBP2-206ENST00000615838 ADCY3O60266 1144 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 ELNP15502 786 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 PRPF38BQ5VTL8 546 aaKnown RBP20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 SLC44A5Q8NCS7 719 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 SLAIN1Q8ND83 568 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 ACER1Q8TDN7 264 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 COA7Q96BR5 231 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 CABP5Q9NP86 173 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 TAOK2Q9UL54 1235 aa20.26■□□□□ 0.83
SDCBP2-206ENST00000615838 GUCY1A2P33402 732 aa20.25■□□□□ 0.83
SDCBP2-206ENST00000615838 HERVK_113P62684 666 aa20.25■□□□□ 0.83
SDCBP2-206ENST00000615838 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
SDCBP2-206ENST00000615838 MPHOSPH10O00566 681 aaKnown RBP20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 CCL5P13501 91 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 SEPT2Q15019 361 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 DYNLL2Q96FJ2 89 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 CRBNQ96SW2 442 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 PUS7LQ9H0K6 701 aaKnown RBP20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 TXNRD2Q9NNW7 524 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 ATP8A2Q9NTI2 1148 aa20.24■□□□□ 0.83
SDCBP2-206ENST00000615838 MORF4L1Q9UBU8 362 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms