RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, human

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-223	ENST00000615525	SLC26A6	Q9BXS9	759 aa		13.67	□□□□□ -0.22
NCAM1-223	ENST00000615525	PANK2	Q9BZ23	570 aa		13.67	□□□□□ -0.22
NCAM1-223	ENST00000615525	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.67	□□□□□ -0.22
NCAM1-223	ENST00000615525	DACT1	Q9NYF0	836 aa		13.67	□□□□□ -0.22
NCAM1-223	ENST00000615525	FOCAD	Q5VW36	1801 aa		13.67	□□□□□ -0.22
NCAM1-223	ENST00000615525	TSPY2	A6NKD2	308 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	MMP1	P03956	469 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	MFSD14B	Q5SR56	506 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	FAM173B	Q6P4H8	233 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	FAM200A	Q8TCP9	573 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	PGBD1	Q96JS3	809 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	LZTS2	Q9BRK4	669 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	FUCA2	Q9BTY2	467 aa		13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.66	□□□□□ -0.22
NCAM1-223	ENST00000615525	SLC39A14	Q15043	492 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	ZNF827	Q17R98	1081 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	DPP8	Q6V1X1	898 aa	Predicted RBP	13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	PODN	Q7Z5L7	613 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	CCAR1	Q8IX12	1150 aa	Known RBP	13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	NUP133	Q8WUM0	1156 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	CNKSR1	Q969H4	720 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	CCDC34	Q96HJ3	373 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	TIGD1	Q96MW7	591 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	MRI	Q9BWK5	157 aa		13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.65	□□□□□ -0.22
NCAM1-223	ENST00000615525	MYO3B	Q8WXR4	1341 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	C10orf71	Q711Q0	1435 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	DDX60L	Q5H9U9	1706 aa	Known RBP	13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	CDK5RAP2	Q96SN8	1893 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	WTIP	A6NIX2	430 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525		H0YIN7	160 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	MMP10	P09238	476 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	LIG1	P18858	919 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	CMA1	P23946	247 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	GUCY1B3	Q02153	619 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	TROAP	Q12815	778 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	ILDR1	Q86SU0	546 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	NBPF11	Q86T75	865 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	NOSTRIN	Q8IVI9	506 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	SUPT20H	Q8NEM7	779 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	KAT14	Q9H8E8	782 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	MKNK2	Q9HBH9	465 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	STK32B	Q9NY57	414 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	POLL	Q9UGP5	575 aa		13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525	HOOK1	Q9UJC3	728 aa	Known RBP	13.64	□□□□□ -0.23
NCAM1-223	ENST00000615525		G3V3G9	751 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	POLR3D	P05423	398 aa	Predicted RBP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	TPM3	P06753	285 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	CALML3	P27482	149 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	SMARCA1	P28370	1054 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	BTD	P43251	543 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	HDLBP	Q00341	1268 aa	Known RBP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	ZRSR1	Q15695	479 aa	Known RBP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	DCAF8	Q5TAQ9	597 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	GALNT17	Q6IS24	598 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	TMTC3	Q6ZXV5	915 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	TEX11	Q8IYF3	940 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	FSIP1	Q8NA03	581 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	PHKB	Q93100	1093 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	ZKSCAN3	Q9BRR0	538 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	NAT10	Q9H0A0	1025 aa	Known RBP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	SH3GLB2	Q9NR46	395 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	CCDC39	Q9UFE4	941 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	NOL7	Q9UMY1	257 aa	Known RBP	13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	TACC3	Q9Y6A5	838 aa		13.63	□□□□□ -0.23
NCAM1-223	ENST00000615525	MYH1	P12882	1939 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	COL11A2	P13942	1736 aa	Predicted RBP	13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	FAM237A	A0A1B0GTK4	181 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	CUTA	O60888	179 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	NR1I2	O75469	434 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	TSPY3	P0CV98	308 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	TSPY8	P0CW00	308 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	RXRA	P19793	462 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	TRAPPC10	P48553	1259 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	TYRO3	Q06418	890 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	HHIPL2	Q6UWX4	724 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	C16orf86	Q6ZW13	317 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	ENGASE	Q8NFI3	743 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	SENP2	Q9HC62	589 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	INCENP	Q9NQS7	918 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	SWAP70	Q9UH65	585 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	PCDHA7	Q9UN72	937 aa		13.62	□□□□□ -0.23
NCAM1-223	ENST00000615525	KRT2	P35908	639 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	FOSB	P53539	338 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	CEBPZ	Q03701	1054 aa	Known RBP	13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	SLC15A2	Q16348	729 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	STX1A	Q16623	288 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	RAB11FIP4	Q86YS3	637 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	CCDC144CP	Q8IYA2	1237 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	DIS3L2	Q8IYB7	885 aa	Known RBP	13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	ZNF579	Q8NAF0	562 aa	Known RBP	13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	PYM1	Q9BRP8	204 aa	Known RBP	13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	MYL10	Q9BUA6	226 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	ANO10	Q9NW15	660 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	USP25	Q9UHP3	1055 aa		13.61	□□□□□ -0.23
NCAM1-223	ENST00000615525	PLIN4	Q96Q06	1357 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms