RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 RBPJLQ9UBG7 517 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 MROH5Q6ZUA9 1318 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 GRXCR1A8MXD5 290 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 IGHA2P01877 340 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 MAPK4P31152 587 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 PBX2P40425 430 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 TFF2Q03403 129 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 PABPC4Q13310 644 aaKnown RBP eCLIP8.68□□□□□ -1.027e-9■■■□□ 14.9
MUC1-227ENST00000615517 FKBP5Q13451 457 aaPredicted RBP8.68□□□□□ -1.02
MUC1-227ENST00000615517 TMEM31Q5JXX7 168 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 PLEKHH3Q7Z736 793 aa8.68□□□□□ -1.02
MUC1-227ENST00000615517 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.02
MUC1-227ENST00000615517 TSR2Q969E8 191 aaKnown RBP8.68□□□□□ -1.02
MUC1-227ENST00000615517 F6X3S4 739 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 UTYO14607 1347 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 PDE8BO95263 885 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 FGFR2P21802 821 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 CNGA1P29973 690 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 HOXA7P31268 230 aaPredicted RBP8.67□□□□□ -1.02
MUC1-227ENST00000615517 KCNQ1P51787 676 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 HERVK_113P62684 666 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 ERVK-9P63128 1117 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 ERVK-24P63145 666 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 TLE2Q04725 743 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 MAP2K5Q13163 448 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
MUC1-227ENST00000615517 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 PBX4Q9BYU1 374 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 CXXC1Q9P0U4 656 aaPredicted RBP8.67□□□□□ -1.02
MUC1-227ENST00000615517 NDUFB9Q9Y6M9 179 aa8.67□□□□□ -1.02
MUC1-227ENST00000615517 KIF16BQ96L93 1317 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 GRM8O00222 908 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 APAF1O14727 1248 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 TBC1D12O60347 775 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 MSCO60682 206 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 GPR37L1O60883 481 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 CYP2C19P33261 490 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 MRE11P49959 708 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 IRX3P78415 501 aaPredicted RBP8.66□□□□□ -1.02
MUC1-227ENST00000615517 POLA2Q14181 598 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 TWISTNBQ3B726 338 aaPredicted RBP8.66□□□□□ -1.02
MUC1-227ENST00000615517 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 MFSD14CQ5VZR4 134 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 NPLOC4Q8TAT6 608 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
MUC1-227ENST00000615517 FERMT2Q96AC1 680 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 EDC3Q96F86 508 aaKnown RBP8.66□□□□□ -1.02
MUC1-227ENST00000615517 SUCLG2Q96I99 432 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 OSBPL5Q9H0X9 879 aaPredicted RBP8.66□□□□□ -1.02
MUC1-227ENST00000615517 ZNF318Q5VUA4 2279 aa8.66□□□□□ -1.02
MUC1-227ENST00000615517 ZDBF2Q9HCK1 2354 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 GAKO14976 1311 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 KIAA0355O15063 1070 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 CNMDO75829 334 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 LDHBP07195 334 aaKnown RBP8.65□□□□□ -1.02
MUC1-227ENST00000615517 CYBAP13498 195 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 IGFBP4P22692 258 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 CAP2P40123 477 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 JAG1P78504 1218 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 CALD1Q05682 793 aaKnown RBP8.65□□□□□ -1.02
MUC1-227ENST00000615517 FPGSQ05932 587 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 PICALMQ13492 652 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 MTMR2Q13614 643 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 C16orf59Q7L2K0 433 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.02
MUC1-227ENST00000615517 PAGR1Q9BTK6 254 aa8.65□□□□□ -1.02
MUC1-227ENST00000615517 SPTBN4Q9H254 2564 aa8.65□□□□□ -1.03
MUC1-227ENST00000615517 ZNF236Q9UL36 1845 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 USP17L5A8MUK1 530 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 CLTBP09497 229 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
MUC1-227ENST00000615517 WDR43Q15061 677 aaKnown RBP eCLIP8.64□□□□□ -1.03
MUC1-227ENST00000615517 LRRC41Q15345 812 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 RASIP1Q5U651 963 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 ARRDC4Q8NCT1 418 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 KLHDC4Q8TBB5 520 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 TBC1D2Q9BYX2 928 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.64□□□□□ -1.03
MUC1-227ENST00000615517 TACC3Q9Y6A5 838 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 USP34Q70CQ2 3546 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 FOCADQ5VW36 1801 aa8.64□□□□□ -1.03
MUC1-227ENST00000615517 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
MUC1-227ENST00000615517 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 SLC15A5A6NIM6 579 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 HOXC6P09630 235 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 IFIT1P09914 478 aaKnown RBP8.63□□□□□ -1.03
MUC1-227ENST00000615517 RAG1P15918 1043 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 PTPREP23469 700 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 BACE1P56817 501 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 RHBDL3P58872 404 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms