RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ANO6Q4KMQ2 910 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 SHISA4Q96DD7 197 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 SAP30BPQ9UHR5 308 aaKnown RBP22.14■■□□□ 1.14
MMP28-204ENST00000615136 KCNJ14Q9UNX9 436 aa22.14■■□□□ 1.14
MMP28-204ENST00000615136 PLEKHA8P1O95397 391 aa22.14■■□□□ 1.13
MMP28-204ENST00000615136 BAG3O95817 575 aa22.14■■□□□ 1.13
MMP28-204ENST00000615136 SLC44A5Q8NCS7 719 aa22.14■■□□□ 1.13
MMP28-204ENST00000615136 RGS22Q8NE09 1264 aa22.14■■□□□ 1.13
MMP28-204ENST00000615136 MXD3Q9BW11 206 aa22.14■■□□□ 1.13
MMP28-204ENST00000615136 GPR75-ASB3A0A0A6YYF3 556 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 hCG_1642624A0A1W2PR95 340 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 LDHCP07864 332 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 PDE6BP35913 854 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
MMP28-204ENST00000615136 FUT2Q10981 343 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 MPNDQ8N594 471 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 CBX8Q9HC52 389 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 POLR3EQ9NVU0 708 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 FAM205AQ6ZU69 1335 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 PDE4BQ07343 736 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 SNW1Q13573 536 aaKnown RBP22.13■■□□□ 1.13
MMP28-204ENST00000615136 DOK7Q18PE1 504 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 RCSD1Q6JBY9 416 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 CERS5Q8N5B7 392 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 PIBF1Q8WXW3 757 aa22.13■■□□□ 1.13
MMP28-204ENST00000615136 CTAGE5O15320 804 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 IGSF3O75054 1194 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 CAVIN2O95810 425 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 U2AF2P26368 475 aaKnown RBP eCLIP22.12■■□□□ 1.13
MMP28-204ENST00000615136 RHBDL3P58872 404 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 LUZP1Q86V48 1076 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.13
MMP28-204ENST00000615136 MASTLQ96GX5 879 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
MMP28-204ENST00000615136 IL17RBQ9NRM6 502 aa22.12■■□□□ 1.13
MMP28-204ENST00000615136 CCDC196A0A1B0GTZ2 297 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 TSPY2A6NKD2 308 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 SLC3A2P08195 630 aaKnown RBP22.11■■□□□ 1.13
MMP28-204ENST00000615136 PLCB2Q00722 1185 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 STK38Q15208 465 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 ANO1Q5XXA6 986 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 CATIPQ7Z7H3 387 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 TRIM22Q8IYM9 498 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 ENGASEQ8NFI3 743 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 NOL10Q9BSC4 688 aaKnown RBP22.11■■□□□ 1.13
MMP28-204ENST00000615136 RGPD3A6NKT7 1758 aaPredicted RBP22.11■■□□□ 1.13
MMP28-204ENST00000615136 RGPD4Q7Z3J3 1758 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 MYH6P13533 1939 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 BTBD18B2RXH4 712 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 DEXIO95424 95 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 TPM3P06753 285 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 ALDH1B1P30837 517 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 TRIM29Q14134 588 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 DPP8Q6V1X1 898 aaPredicted RBP22.11■■□□□ 1.13
MMP28-204ENST00000615136 FBXW7Q969H0 707 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 COA1Q9GZY4 146 aa22.11■■□□□ 1.13
MMP28-204ENST00000615136 TTC12Q9H892 705 aaPredicted RBP22.11■■□□□ 1.13
MMP28-204ENST00000615136 ROBO3Q96MS0 1386 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 DDX60LQ5H9U9 1706 aaKnown RBP22.1■■□□□ 1.13
MMP28-204ENST00000615136 F8W031 263 aaPredicted RBP22.1■■□□□ 1.13
MMP28-204ENST00000615136 YEATS4O95619 227 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 MMP1P03956 469 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 TFAP4Q01664 338 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 PKN1Q16512 942 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 FSIP1Q8NA03 581 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 ZC3H12CQ9C0D7 883 aaKnown RBP22.1■■□□□ 1.13
MMP28-204ENST00000615136 GAKO14976 1311 aa22.1■■□□□ 1.13
MMP28-204ENST00000615136 SPTLC2O15270 562 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 FAM160A1Q05DH4 1040 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 SF3A1Q15459 793 aaKnown RBP22.09■■□□□ 1.13
MMP28-204ENST00000615136 CCDC73Q6ZRK6 1079 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 TEX11Q8IYF3 940 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 ZNF830Q96NB3 372 aaPredicted RBP22.09■■□□□ 1.13
MMP28-204ENST00000615136 R3HCC1Q9Y3T6 440 aaKnown RBP22.09■■□□□ 1.13
MMP28-204ENST00000615136 A0A1B0GVL5 298 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 GNL2Q13823 731 aaKnown RBP22.09■■□□□ 1.13
MMP28-204ENST00000615136 SLC15A2Q16348 729 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 ADALQ6DHV7 355 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 C2CD5Q86YS7 1000 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 OXER1Q8TDS5 423 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 TBC1D22AQ8WUA7 517 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 WASF1Q92558 559 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 FAM163AQ96GL9 167 aaPredicted RBP22.09■■□□□ 1.13
MMP28-204ENST00000615136 DAGLAQ9Y4D2 1042 aa22.09■■□□□ 1.13
MMP28-204ENST00000615136 FLT1P17948 1338 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 USP17L3A6NCW0 530 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 USP17L4A6NCW7 530 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 WDHD1O75717 1129 aaPredicted RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 MARCKSP29966 332 aaPredicted RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 CHRNA5P30532 468 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 USP17L1Q7RTZ2 530 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 DIS3L2Q8IYB7 885 aaKnown RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 MAP3K14Q99558 947 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 RNF26Q9BY78 433 aaPredicted RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 PDGFDQ9GZP0 370 aaPredicted RBP22.08■■□□□ 1.13
MMP28-204ENST00000615136 KCNQ5Q9NR82 932 aa22.08■■□□□ 1.13
MMP28-204ENST00000615136 ADAMTSL1Q8N6G6 1762 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms