RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 DDTLA6NHG4 134 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-205ENST00000614931 MINDY4BA8MYZ0 360 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 IREB2P48200 963 aaKnown RBP9.54□□□□□ -0.88
PCDH9-205ENST00000614931 TNNI2P48788 182 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 PLCD1P51178 756 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 TCP10Q12799 353 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 IMMTQ16891 758 aaKnown RBP9.54□□□□□ -0.88
PCDH9-205ENST00000614931 FKBP1CQ5VVH2 108 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 FAM83AQ86UY5 434 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 ABHD8Q96I13 439 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 CLMNQ96JQ2 1002 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 ARPP21Q9UBL0 812 aaPredicted RBP9.54□□□□□ -0.88
PCDH9-205ENST00000614931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
PCDH9-205ENST00000614931 MYH4Q9Y623 1939 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
PCDH9-205ENST00000614931 ZNF213O14771 459 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
PCDH9-205ENST00000614931 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
PCDH9-205ENST00000614931 ANTXR2P58335 489 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 SREBF2Q12772 1141 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
PCDH9-205ENST00000614931 RABEP1Q15276 862 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 AKNAD1Q5T1N1 836 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 MB21D2Q8IYB1 491 aaPredicted RBP9.53□□□□□ -0.88
PCDH9-205ENST00000614931 ANKRD13AQ8IZ07 590 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 STAG1Q8WVM7 1258 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 WNK4Q96J92 1243 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 TTC14Q96N46 770 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 TM6SF1Q9BZW5 370 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 TMEM39BQ9GZU3 492 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 DNAJC18Q9H819 358 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
PCDH9-205ENST00000614931 ATRNL1Q5VV63 1379 aa9.52□□□□□ -0.88
PCDH9-205ENST00000614931 MANSC4A6NHS7 340 aaPredicted RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 B4E1Z4 1266 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 PRDM1O75626 825 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 ZKSCAN1P17029 563 aaPredicted RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 CASTP20810 708 aaKnown RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 INHBEP58166 350 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 GABPAQ06546 454 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 NOM1Q5C9Z4 860 aaKnown RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 CYB5R4Q7L1T6 521 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 NEK1Q96PY6 1258 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 MCOLN1Q9GZU1 580 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 GPHNQ9NQX3 736 aaPredicted RBP9.52□□□□□ -0.89
PCDH9-205ENST00000614931 TMOD2Q9NZR1 351 aa9.52□□□□□ -0.89
PCDH9-205ENST00000614931 ENTPD3O75355 529 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 TBC1D8O95759 1140 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 FGRP09769 529 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 RPS6KB1P23443 525 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 GJA5P36382 358 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 NEK4P51957 841 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 EXOSC10Q01780 885 aaKnown RBP9.51□□□□□ -0.89
PCDH9-205ENST00000614931 DGKZQ13574 1117 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 TOB2Q14106 344 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-205ENST00000614931 KRT32Q14532 448 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 BLOC1S2Q6QNY1 142 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.51□□□□□ -0.89
PCDH9-205ENST00000614931 C16orf86Q6ZW13 317 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 CHST3Q7LGC8 479 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 IFNL1Q8IU54 200 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.51□□□□□ -0.89
PCDH9-205ENST00000614931 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 DOCK1Q14185 1865 aa9.51□□□□□ -0.89
PCDH9-205ENST00000614931 PHIPQ8WWQ0 1821 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-205ENST00000614931 ORC4O43929 436 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 LARGE1O95461 756 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 RASA1P20936 1047 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 SHMT1P34896 483 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 CDK8P49336 464 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
PCDH9-205ENST00000614931 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
PCDH9-205ENST00000614931 MFSD6Q6ZSS7 791 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 NCOA7Q8NI08 942 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 FAM151AQ8WW52 585 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
PCDH9-205ENST00000614931 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 SENP2Q9HC62 589 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
PCDH9-205ENST00000614931 MYH6P13533 1939 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 GPR25O00155 361 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 IGF2BP3O00425 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 PRC1O43663 620 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms