RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
TMEM254-213ENST00000613758 ANGEL1Q9UNK9 670 aaKnown RBP16.19■□□□□ 0.18
TMEM254-213ENST00000613758 ERICH2A1L162 156 aa16.18■□□□□ 0.18
TMEM254-213ENST00000613758 SLURP2P0DP57 97 aa16.18■□□□□ 0.18
TMEM254-213ENST00000613758 NBR1Q14596 966 aa16.18■□□□□ 0.18
TMEM254-213ENST00000613758 UTRNP46939 3433 aa16.18■□□□□ 0.18
TMEM254-213ENST00000613758 TSPY3P0CV98 308 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 TSPY8P0CW00 308 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 SHMT1P34896 483 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 ME3Q16798 604 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
TMEM254-213ENST00000613758 DNAJC18Q9H819 358 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 LY9Q9HBG7 655 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 SH2B1Q9NRF2 756 aaPredicted RBP16.17■□□□□ 0.18
TMEM254-213ENST00000613758 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 LARGE1O95461 756 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 LIFRP42702 1097 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 EVCP57679 992 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 CUL4AQ13619 759 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 WTAPQ15007 396 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
TMEM254-213ENST00000613758 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
TMEM254-213ENST00000613758 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
TMEM254-213ENST00000613758 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 EPHX2P34913 555 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 SEC23AQ15436 765 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 SENP2Q9HC62 589 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 TNKSO95271 1327 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 NMT2O60551 498 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 NFXL1Q6ZNB6 911 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 ENAHQ8N8S7 591 aaPredicted RBP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 ZNF274Q96GC6 653 aaPredicted RBP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 TEPSINQ96N21 525 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 TCP11L1Q9NUJ3 509 aa16.16■□□□□ 0.18
TMEM254-213ENST00000613758 HERC5Q9UII4 1024 aaKnown RBP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
TMEM254-213ENST00000613758 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 STK3Q13188 491 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 TATDN1Q6P1N9 297 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 USP50Q70EL3 339 aaPredicted RBP16.15■□□□□ 0.18
TMEM254-213ENST00000613758 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 NECAB1Q8N987 351 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
TMEM254-213ENST00000613758 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 CCDC69A6NI79 296 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 SIPA1L1O43166 1804 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 AKR1B1P15121 316 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.17
TMEM254-213ENST00000613758 CCDC178Q5BJE1 867 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 CCDC17Q96LX7 622 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 POTECB2RU33 542 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 TBC1D12O60347 775 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.17
TMEM254-213ENST00000613758 IFIT1BQ5T764 474 aaKnown RBP16.14■□□□□ 0.17
TMEM254-213ENST00000613758 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
TMEM254-213ENST00000613758 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
TMEM254-213ENST00000613758 PITPNM2Q9BZ72 1349 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 PFKFB2O60825 505 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 MPHOSPH10O00566 681 aaKnown RBP16.13■□□□□ 0.17
TMEM254-213ENST00000613758 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
TMEM254-213ENST00000613758 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.13■□□□□ 0.17
TMEM254-213ENST00000613758 SLC12A7Q9Y666 1083 aa16.13■□□□□ 0.17
TMEM254-213ENST00000613758 GOLGA8BA8MQT2 603 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 MAP3K10Q02779 954 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 ST3GAL1Q11201 340 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 NBPF12Q5TAG4 269 aaPredicted RBP16.12■□□□□ 0.17
TMEM254-213ENST00000613758 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 ANKS1AQ92625 1134 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
TMEM254-213ENST00000613758 PPP2R3BQ9Y5P8 575 aa16.12■□□□□ 0.17
TMEM254-213ENST00000613758 CCT2P78371 535 aaKnown RBP16.11■□□□□ 0.17
TMEM254-213ENST00000613758 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 PRAMEF18Q5VWM3 479 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 ZC3H15Q8WU90 426 aaKnown RBP16.11■□□□□ 0.17
TMEM254-213ENST00000613758 GTF3C6Q969F1 213 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 PLIN4Q96Q06 1357 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 IGKV6D-41A0A0C4DH26 115 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 ZBTB43O43298 467 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 SCRN1Q12765 414 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
TMEM254-213ENST00000613758 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
TMEM254-213ENST00000613758 CEP95Q96GE4 821 aa16.11■□□□□ 0.17
TMEM254-213ENST00000613758 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
TMEM254-213ENST00000613758 GDF11O95390 407 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms