RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZC3H12CQ9C0D7 883 aaKnown RBP25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 GOLGA6L9A6NEM1 432 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 JAK2O60674 1132 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 GPR162Q16538 588 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 CAVIN4Q5BKX8 364 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 TTC39AQ5SRH9 613 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 FAM227BQ96M60 508 aa25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 RTFDC1Q9BY42 306 aaPredicted RBP25.14■■□□□ 1.62
POLR2J3-220ENST00000613744 SMC2O95347 1197 aa25.14■■□□□ 1.61
POLR2J3-220ENST00000613744 IFNKQ9P0W0 207 aa25.14■■□□□ 1.61
POLR2J3-220ENST00000613744 RSPH14Q9UHP6 348 aa25.14■■□□□ 1.61
POLR2J3-220ENST00000613744 ARFGEF1Q9Y6D6 1849 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 ZSCAN12O43309 604 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 ATP5JP18859 108 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 NOP2P46087 812 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 FKBP4Q02790 459 aaKnown RBP eCLIP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 ZRSR1Q15695 479 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 MSL3Q8N5Y2 521 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 FSIP1Q8NA03 581 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 CHMP4CQ96CF2 233 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 TAOK3Q9H2K8 898 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 ARFGAP3Q9NP61 516 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 HIBADHP31937 336 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 EVCP57679 992 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 STK3Q13188 491 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 SCARF1Q14162 830 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 PI16Q6UXB8 463 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 FMR1NBQ8N0W7 255 aaPredicted RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 MRPS27Q92552 414 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 TMX1Q9H3N1 280 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 JAG2Q9Y219 1238 aa25.13■■□□□ 1.61
POLR2J3-220ENST00000613744 PPIP5K2O43314 1243 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 IVLP07476 585 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 GOLGA6L1Q8N7Z2 621 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 EDC3Q96F86 508 aaKnown RBP25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 PSMD1Q99460 953 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 EYA3Q99504 573 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 DBNDD1Q9H9R9 158 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 ARAP2Q8WZ64 1704 aa25.12■■□□□ 1.61
POLR2J3-220ENST00000613744 IKBKBO14920 756 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 MYO1BO43795 1136 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 FBXO33Q7Z6M2 555 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 SRLQ86TD4 932 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 RABGGTAQ92696 567 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 NEK1Q96PY6 1258 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 KIAA1468Q9P260 1216 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 FER1L6Q2WGJ9 1857 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 CBFA2T2O43439 604 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 URI1O94763 535 aaPredicted RBP25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 NOM1Q5C9Z4 860 aaKnown RBP25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 SUPT20HQ8NEM7 779 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 CARD6Q9BX69 1037 aa25.11■■□□□ 1.61
POLR2J3-220ENST00000613744 RFX7Q2KHR2 1363 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 G3V3G9 751 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 PFKFB2O60825 505 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 SASH3O75995 380 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 GRIPAP1Q4V328 841 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 DCAF8Q5TAQ9 597 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 ADALQ6DHV7 355 aa25.1■■□□□ 1.61
POLR2J3-220ENST00000613744 A0A0D9SFI3 127 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 PRELPP51888 382 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 RSRC2Q7L4I2 434 aaKnown RBP25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 ZNF804AQ7Z570 1209 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 REXO1L1PQ8IX06 675 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 TCEANC2Q96MN5 208 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 USP28Q96RU2 1077 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 RPS6KA5O75582 802 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 SEC31AO94979 1220 aaKnown RBP25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 MCAMP43121 646 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 NLRP12P59046 1061 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 SDF4Q9BRK5 362 aa25.09■■□□□ 1.61
POLR2J3-220ENST00000613744 ACTN2P35609 894 aa25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 MAP3K9P80192 1104 aa25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 COL9A3Q14050 684 aaPredicted RBP25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 C15orf52Q6ZUT6 534 aaKnown RBP25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 LARGE2Q8N3Y3 721 aa25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 CD209Q9NNX6 404 aa25.08■■□□□ 1.61
POLR2J3-220ENST00000613744 RASGRF1Q13972 1273 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 BRD3Q15059 726 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 HAUS7Q99871 368 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 FUT8Q9BYC5 575 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 BRMS1Q9HCU9 246 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 KCNQ5Q9NR82 932 aa25.08■■□□□ 1.6
POLR2J3-220ENST00000613744 DHX16O60231 1041 aaKnown RBP25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 HMGB1P09429 215 aaKnown RBP25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 DDX11Q96FC9 970 aa25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 FSD1Q9BTV5 496 aa25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 RTEL1Q9NZ71 1219 aa25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 U3KPZ7 1027 aaPredicted RBP25.07■■□□□ 1.6
POLR2J3-220ENST00000613744 CCDC151A5D8V7 595 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 GOLIM4O00461 696 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 IARSP41252 1262 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 ME1P48163 572 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 GEMIN8Q9NWZ8 242 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 RRP15Q9Y3B9 282 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 ARID4AP29374 1257 aaPredicted RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 CEBPZQ03701 1054 aaKnown RBP25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 NCAPHQ15003 741 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 Q6ZUG5 572 aa25.06■■□□□ 1.6
POLR2J3-220ENST00000613744 NSUN7Q8NE18 718 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms