RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 SERPINB13Q9UIV8 391 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 SLC12A7Q9Y666 1083 aa17.32■□□□□ 0.36
CIT-219ENST00000612548 WNT10BO00744 389 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 ZBTB43O43298 467 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 JAK2O60674 1132 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 ENTPD3O75355 529 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 NT5C2P49902 561 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 NBPF9Q3BBW0 867 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 IFIT1BQ5T764 474 aaKnown RBP17.31■□□□□ 0.36
CIT-219ENST00000612548 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
CIT-219ENST00000612548 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
CIT-219ENST00000612548 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
CIT-219ENST00000612548 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
CIT-219ENST00000612548 MYO1BO43795 1136 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 EGFRP00533 1210 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 METAP2P50579 478 aaKnown RBP eCLIP17.3■□□□□ 0.36
CIT-219ENST00000612548 SYNE3Q6ZMZ3 975 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 TMTC2Q8N394 836 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 GOLGA8AA7E2F4 631 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 MMP14P50281 582 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 NUCB2P80303 420 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 RAB3GAP1Q15042 981 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
CIT-219ENST00000612548 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
CIT-219ENST00000612548 EHD4Q9H223 541 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 SWAP70Q9UH65 585 aa17.3■□□□□ 0.36
CIT-219ENST00000612548 COL2A1P02458 1487 aaPredicted RBP17.29■□□□□ 0.36
CIT-219ENST00000612548 ATRNL1Q5VV63 1379 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 GPR162Q16538 588 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
CIT-219ENST00000612548 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
CIT-219ENST00000612548 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 PI4KBQ9UBF8 816 aa17.29■□□□□ 0.36
CIT-219ENST00000612548 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 SHMT1P34896 483 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 GPC2Q8N158 579 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 DDX11Q96FC9 970 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 DNAJC18Q9H819 358 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 CNTNAP1P78357 1384 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 FAM196BA6NMK8 535 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 CPLX1O14810 134 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 KIF4BQ2VIQ3 1234 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 NUP133Q8WUM0 1156 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 CHMP4CQ96CF2 233 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 CSRNP1Q96S65 589 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 TRIM34Q9BYJ4 488 aa17.28■□□□□ 0.36
CIT-219ENST00000612548 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.35
CIT-219ENST00000612548 AKR1B1P15121 316 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 CDC27P30260 824 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.35
CIT-219ENST00000612548 FKBP1CQ5VVH2 108 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 RCSD1Q6JBY9 416 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 FAM151AQ8WW52 585 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.35
CIT-219ENST00000612548 TCP11L1Q9NUJ3 509 aa17.27■□□□□ 0.35
CIT-219ENST00000612548 NID2Q14112 1375 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 H7C1D1 291 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 SYT1P21579 422 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
CIT-219ENST00000612548 RTN1Q16799 776 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 CCDC178Q5BJE1 867 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
CIT-219ENST00000612548 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 ZDHHC9Q9Y397 364 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
CIT-219ENST00000612548 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 FAM184AQ8NB25 1140 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 TMEM39BQ9GZU3 492 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 FAM217BQ9NTX9 383 aaPredicted RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 STX8Q9UNK0 236 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 SCAF8Q9UPN6 1271 aaKnown RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 SOCS7O14512 581 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 STX6O43752 255 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 BRD1O95696 1058 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 RCAN1P53805 252 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 FAM83AQ86UY5 434 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 DGKHQ86XP1 1220 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
CIT-219ENST00000612548 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
CIT-219ENST00000612548 GREB1LQ9C091 1923 aaPredicted RBP17.24■□□□□ 0.35
CIT-219ENST00000612548 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
CIT-219ENST00000612548 DDAH1O94760 285 aa17.24■□□□□ 0.35
CIT-219ENST00000612548 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
CIT-219ENST00000612548 CPLX2Q6PUV4 134 aaKnown RBP17.24■□□□□ 0.35
CIT-219ENST00000612548 CDAN1Q8IWY9 1227 aa17.24■□□□□ 0.35
CIT-219ENST00000612548 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms