RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 SF3A3Q12874 501 aaKnown RBP eCLIP21.34■■□□□ 1.017e-7■■■■□ 19.8
SREBF2-209ENST00000612482 SMC1BQ8NDV3 1235 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 WWC3Q9ULE0 1092 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 NPC1L1Q9UHC9 1359 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 PPFIA1Q13136 1202 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 NCAPH2Q6IBW4 605 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 NUP153P49790 1475 aaKnown RBP21.34■■□□□ 1.01
SREBF2-209ENST00000612482 TRAPPC8Q9Y2L5 1435 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 TAF5LO75529 589 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 ZAP70P43403 619 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 PLEKHA4Q9H4M7 779 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
SREBF2-209ENST00000612482 B4DLN1 442 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 NOL3O60936 208 aaKnown RBP21.33■■□□□ 1.01
SREBF2-209ENST00000612482 NELFCDQ8IXH7 590 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 FAM204AQ9H8W3 233 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 LRMPQ12912 555 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 MYSM1Q5VVJ2 828 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 PNMA8AQ86V59 439 aaPredicted RBP21.33■■□□□ 1.01
SREBF2-209ENST00000612482 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1.01
SREBF2-209ENST00000612482 FAM207AQ9NSI2 230 aaPredicted RBP21.33■■□□□ 1.01
SREBF2-209ENST00000612482 AATFQ9NY61 560 aaKnown RBP eCLIP21.33■■□□□ 1.017e-7■■□□□ 12.7
SREBF2-209ENST00000612482 KIAA1468Q9P260 1216 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 BICRAQ9NZM4 1560 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 BUB1BO60566 1050 aaPredicted RBP21.33■■□□□ 1.01
SREBF2-209ENST00000612482 HSPA1LP34931 641 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 SMTNP53814 917 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 RAD51AP2Q09MP3 1159 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 GCKRQ14397 625 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 RPS6KA1Q15418 735 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 ADALQ6DHV7 355 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 TYW1BQ6NUM6 668 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 UIMC1Q96RL1 719 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 VPS54Q9P1Q0 977 aa21.33■■□□□ 1.01
SREBF2-209ENST00000612482 PKP1Q13835 747 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 CEP128Q6ZU80 1094 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 PDE8AO60658 829 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 PFKFB1P16118 471 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 RASA3Q14644 834 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 ERCC6LQ2NKX8 1250 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 VSIG1Q86XK7 387 aa21.33■■□□□ 1
SREBF2-209ENST00000612482 ZNF532Q9HCE3 1301 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 YTHDC2Q9H6S0 1430 aaKnown RBP21.32■■□□□ 1
SREBF2-209ENST00000612482 E7EVH7 732 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 ARHGAP25P42331 645 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 LIN9Q5TKA1 542 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 KRT25Q7Z3Z0 450 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 IFIH1Q9BYX4 1025 aaKnown RBP21.32■■□□□ 1
SREBF2-209ENST00000612482 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 DESI2Q9BSY9 194 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 SFMBT2Q5VUG0 894 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 MAEAQ7L5Y9 396 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 TAOK1Q7L7X3 1001 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 CABP7Q86V35 215 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 PALD1Q9ULE6 856 aa21.32■■□□□ 1
SREBF2-209ENST00000612482 TCOF1Q13428 1488 aaKnown RBP21.31■■□□□ 1
SREBF2-209ENST00000612482 RRAGAQ7L523 313 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 ZNF131P52739 623 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 CACNA2D3Q8IZS8 1091 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 KIFC2Q96AC6 838 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 DSCC1Q9BVC3 393 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 PPP1R12CQ9BZL4 782 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 ZNF500O60304 480 aaPredicted RBP21.31■■□□□ 1
SREBF2-209ENST00000612482 TSKSQ9UJT2 592 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 SAR1BQ9Y6B6 198 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 ARHGEF35A5YM69 484 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 FLOT1O75955 427 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 CA8P35219 290 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 ADCY7P51828 1080 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 PEX26Q7Z412 305 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 CCDC84Q86UT8 332 aaPredicted RBP21.31■■□□□ 1
SREBF2-209ENST00000612482 TRPM2O94759 1503 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 SBNO1A3KN83 1393 aa21.31■■□□□ 1
SREBF2-209ENST00000612482 CLNS1AP54105 237 aaKnown RBP21.3■■□□□ 1
SREBF2-209ENST00000612482 PTH1RQ03431 593 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 PPP2R5BQ15173 497 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 USP28Q96RU2 1077 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 NLRC4Q9NPP4 1024 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 A1BGP04217 495 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 GKAP1Q5VSY0 366 aaPredicted RBP21.3■■□□□ 1
SREBF2-209ENST00000612482 EYA3Q99504 573 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 LMNTD2Q8IXW0 634 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 GPT2Q8TD30 523 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 LPIN2Q92539 896 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 DDX41Q9UJV9 622 aaKnown RBP21.3■■□□□ 1
SREBF2-209ENST00000612482 CALCRLQ16602 461 aa21.3■■□□□ 1
SREBF2-209ENST00000612482 UFL1O94874 794 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 C2CD5Q86YS7 1000 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 SPATA5Q8NB90 893 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 VTI1AQ96AJ9 217 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 CCDC105Q8IYK2 499 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 ARHGEF2Q92974 986 aaKnown RBP21.29■■□□□ 1
SREBF2-209ENST00000612482 ZNF215Q9UL58 517 aaPredicted RBP21.29■■□□□ 1
SREBF2-209ENST00000612482 MTMR6Q9Y217 621 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 ATP5JP18859 108 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 ARID4AP29374 1257 aaPredicted RBP21.29■■□□□ 1
SREBF2-209ENST00000612482 KRT71Q3SY84 523 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 PLCD3Q8N3E9 789 aa21.29■■□□□ 1
SREBF2-209ENST00000612482 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms