RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 PCDHA5Q9Y5H7 936 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 V9GY48 417 aaPredicted RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 A0A1B0GUL6 1792 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 LAMB2P55268 1798 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 TNNT1P13805 278 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 CASP1P29466 404 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 ESR2Q92731 530 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 ZSCAN10Q96SZ4 725 aaPredicted RBP16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 STK36Q9NRP7 1315 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 GRIK5Q16478 980 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 PKN1Q16512 942 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
PCDHGA3-202ENST00000612467 NPHP1O15259 732 aa16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 POLR2DO15514 142 aaKnown RBP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 IFIT1BQ5T764 474 aaKnown RBP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 SERTAD1Q9UHV2 236 aa16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 DEXIO95424 95 aa16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 KRBA2Q6ZNG9 492 aa16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
PCDHGA3-202ENST00000612467 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 ARMCX5Q6P1M9 558 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 MYH6P13533 1939 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 TRMT44Q8IYL2 757 aaKnown RBP16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 JMYQ8N9B5 988 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 CCNL1Q9UK58 526 aaPredicted RBP16.2■□□□□ 0.18
PCDHGA3-202ENST00000612467 CUTAO60888 179 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 ZPR1O75312 459 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 CSRNP2Q9H175 543 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 DCP1AQ9NPI6 582 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 FANCCQ00597 558 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 FUT2Q10981 343 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 NFIXQ14938 502 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 FANCLQ9NW38 375 aa16.19■□□□□ 0.18
PCDHGA3-202ENST00000612467 DUOX1Q9NRD9 1551 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 A0A087X0B3 334 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 PDCL3Q9H2J4 239 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 ANAPC4Q9UJX5 808 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 TM4SF1P30408 202 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 TROAPQ12815 778 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 WASF1Q92558 559 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 STAMQ92783 540 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 COBLO75128 1261 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
PCDHGA3-202ENST00000612467 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 PTPREP23469 700 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 AKAP17AQ02040 695 aaKnown RBP16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 ZNF174Q15697 407 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 NID2Q14112 1375 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 MDM2Q00987 491 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 TIGD1Q96MW7 591 aa16.17■□□□□ 0.18
PCDHGA3-202ENST00000612467 CCDC196A0A1B0GTZ2 297 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 AFMP43652 599 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 DHX58Q96C10 678 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 MCM9Q9NXL9 1143 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 ANKIB1Q9P2G1 1089 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 MAN1B1Q9UKM7 699 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 V9GYY5 206 aaPredicted RBP16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 FAM237AA0A1B0GTK4 181 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 RILPL1Q5EBL4 403 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 IQCA1Q86XH1 822 aa16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
PCDHGA3-202ENST00000612467 SERPINC1P01008 464 aa16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 POSTNQ15063 836 aa16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 NPY5RQ15761 445 aa16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 MED15Q96RN5 788 aa16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 RNF26Q9BY78 433 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
PCDHGA3-202ENST00000612467 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms