RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PLXNA1Q9UIW2 1896 aa9.13□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 KCNQ1P51787 676 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TFF2Q03403 129 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 MORN1Q5T089 497 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 LDHAL6AQ6ZMR3 332 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TXNRD2Q9NNW7 524 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 DDX20Q9UHI6 824 aaKnown RBP9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SUGT1Q9Y2Z0 365 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CACNA1AO00555 2505 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 DOCK1Q14185 1865 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
PTCHD3P1-201ENST00000612350 MAST3O60307 1309 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 MYBBP1AQ9BQG0 1328 aaKnown RBP9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PBX2P40425 430 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 Q3C1V9 767 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 C1orf53Q5VUE5 145 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SH3BP5LQ7L8J4 393 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PBX4Q9BYU1 374 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PRKRIP1Q9H875 184 aaPredicted RBP9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 FLRT1Q9NZU1 646 aa9.11□□□□□ -0.95
PTCHD3P1-201ENST00000612350 DOCK2Q92608 1830 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SMIM22K7EJ46 135 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 RIOK3O14730 519 aaKnown RBP9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 ANP32CO43423 234 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 MSCO60682 206 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 IGFBP4P22692 258 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 RGS2P41220 211 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SPP2Q13103 211 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 GJC2Q5T442 439 aaPredicted RBP9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 APBA2Q99767 749 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 CNNM1Q9NRU3 951 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TACC3Q9Y6A5 838 aa9.1□□□□□ -0.95
PTCHD3P1-201ENST00000612350 GRXCR1A8MXD5 290 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PI4K2BG5E9Z4 385 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 KIAA0355O15063 1070 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TLL1O43897 1013 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 IGHA2P01877 340 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 MAPK4P31152 587 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 NHLH1Q02575 133 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TLE2Q04725 743 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PABPC4Q13310 644 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 AAK1Q2M2I8 961 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 EPHA10Q5JZY3 1008 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 G2E3Q7L622 706 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 GPR142Q7Z601 462 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 GPRC5AQ8NFJ5 357 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PUS3Q9BZE2 481 aaKnown RBP9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 PORCNQ9H237 461 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 USP40Q9NVE5 1235 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 RBPJLQ9UBG7 517 aa9.09□□□□□ -0.95
PTCHD3P1-201ENST00000612350 UTYO14607 1347 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 DDTLA6NHG4 134 aaPredicted RBP9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ERC2O15083 957 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ENTPD3O75355 529 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CNGA1P29973 690 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 HMGCS2P54868 508 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MAP2K5Q13163 448 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RASIP1Q5U651 963 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MFSD14CQ5VZR4 134 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PLEKHH3Q7Z736 793 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 VPS37DQ86XT2 251 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TSPYL6Q8N831 410 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ARRDC4Q8NCT1 418 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 IDI2Q9BXS1 227 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
PTCHD3P1-201ENST00000612350 PRR33A8MZF0 331 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CLTBP09497 229 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ADCYAP1R1P41586 468 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RGS3P49796 1198 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 FPGSQ05932 587 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CCDC57Q2TAC2 916 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 C16orf59Q7L2K0 433 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 LINS1Q8NG48 757 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CD320Q9NPF0 282 aa9.07□□□□□ -0.96
PTCHD3P1-201ENST00000612350 KBTBD13C9JR72 458 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 TBC1D12O60347 775 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 CYBAP13498 195 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 RAG1P15918 1043 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 HERVK_113P62684 666 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
PTCHD3P1-201ENST00000612350 ERVK-24P63145 666 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms