RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 MCM6Q14566 821 aa7.56□□□□□ -1.2
PBX1-221ENST00000612123 DLGAP5Q15398 846 aa7.56□□□□□ -1.2
PBX1-221ENST00000612123 BEND3Q5T5X7 828 aa7.56□□□□□ -1.2
PBX1-221ENST00000612123 TCERG1LQ5VWI1 586 aa7.56□□□□□ -1.2
PBX1-221ENST00000612123 FERMT2Q96AC1 680 aa7.56□□□□□ -1.2
PBX1-221ENST00000612123 PTPDC1A2A3K4 754 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 RPS6KB1P23443 525 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 PSMD2Q13200 908 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 MAP9Q49MG5 647 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 RRAGBQ5VZM2 374 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 TEKT1Q969V4 418 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 ALS2CR12Q96Q35 445 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 NUP88Q99567 741 aaPredicted RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 CWC15Q9P013 229 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 TDRD12Q587J7 1177 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 USP48Q86UV5 1035 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 PRR36Q9H6K5 1346 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 N4BP3O15049 544 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 PLEKHF1Q96S99 279 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 NAA15Q9BXJ9 866 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 IMPG2Q9BZV3 1241 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 EHD4Q9H223 541 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 MRFAP1Q9Y605 127 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 LIG1P18858 919 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 KRT27Q7Z3Y8 459 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 TMEM87AQ8NBN3 555 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 TECPR2O15040 1411 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 PRPHP41219 470 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 ACTN3Q08043 901 aaPredicted RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 TTC31Q49AM3 519 aaPredicted RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 PDLIM2Q96JY6 352 aa7.55□□□□□ -1.2
PBX1-221ENST00000612123 TSPYL2Q9H2G4 693 aaPredicted RBP7.55□□□□□ -1.2
PBX1-221ENST00000612123 BCCIPQ9P287 314 aaKnown RBP eCLIP7.55□□□□□ -1.2
PBX1-221ENST00000612123 ENO4A6NNW6 628 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 ATP2C2O75185 946 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 CASQ1P31415 396 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 HAUS3Q68CZ6 603 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 TAOK3Q9H2K8 898 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 NEFHP12036 1026 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 KRT25Q7Z3Z0 450 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 DDX12PQ92771 950 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 SPAG5Q96R06 1193 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 LRRC2Q9BYS8 371 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 C1orf167Q5SNV9 1468 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 GRIPAP1Q4V328 841 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 DPY19L2Q6NUT2 758 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 ARMCX6Q7L4S7 300 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 CHURC1Q8WUH1 139 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 ANKRD7Q92527 254 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 BICD1Q96G01 975 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 NCAPGQ9BPX3 1015 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 POTEB2H3BUK9 544 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 CYLC1P35663 651 aaPredicted RBP7.54□□□□□ -1.2
PBX1-221ENST00000612123 ASIC1P78348 528 aa7.54□□□□□ -1.2
PBX1-221ENST00000612123 MRPS25P82663 173 aaKnown RBP7.54□□□□□ -1.2
PBX1-221ENST00000612123 PPIP5K2O43314 1243 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 ADRA2BP18089 450 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 OAS2P29728 719 aaKnown RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 SSR1P43307 286 aaKnown RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 APOBRQ0VD83 1088 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 UBE3CQ15386 1083 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 TAF3Q5VWG9 929 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 TCEANC2Q96MN5 208 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 CD248Q9HCU0 757 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 KNDC1Q76NI1 1749 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 ADGRB1O14514 1584 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 SLC27A2O14975 620 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 KIF4BQ2VIQ3 1234 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 AXDND1Q5T1B0 1012 aaPredicted RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 AS3MTQ9HBK9 375 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 TNS3Q68CZ2 1445 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 USP31Q70CQ4 1352 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 PDE8BO95263 885 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 CRKLP46109 303 aaKnown RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 GEMIN8Q9NWZ8 242 aaKnown RBP7.53□□□□□ -1.2
PBX1-221ENST00000612123 VPS18Q9P253 973 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 ATP10DQ9P241 1426 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 XDHP47989 1333 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 ZBED4O75132 1171 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 TUBB4BP68371 445 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 PABPC4Q13310 644 aaKnown RBP eCLIP7.53□□□□□ -1.2
PBX1-221ENST00000612123 CCDC65Q8IXS2 484 aa7.53□□□□□ -1.2
PBX1-221ENST00000612123 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms