RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
TP53-220ENST00000610623 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 DISP2A7MBM2 1401 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 COL16A1Q07092 1604 aaPredicted RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CTAGE9A4FU28 777 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 RNF40O75150 1001 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CTAGE8P0CG41 777 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 ATP5JP18859 108 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CT47A1Q5JQC4 288 aaPredicted RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 WWC2Q6AWC2 1192 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 CTAGE4Q8IX94 777 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 HPSEQ9Y251 543 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 A0A087WZG4 1122 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 LRRIQ3A6PVS8 624 aaPredicted RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 ANKRD65E5RJM6 399 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 PHACTR2O75167 634 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 MCM3P25205 808 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 CASP7P55210 303 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 KIF4BQ2VIQ3 1234 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 C8orf76Q96K31 380 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 DESI2Q9BSY9 194 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 NCOA5Q9HCD5 579 aaKnown RBP13.56□□□□□ -0.24
TP53-220ENST00000610623 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
TP53-220ENST00000610623 LAMA4Q16363 1823 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 PRPF6O94906 941 aaKnown RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 POLR3DP05423 398 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 ELOA2Q8IYF1 753 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 IRX2Q9BZI1 471 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 ZNF609O15014 1411 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 H7C1W4 665 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 PPP6R2O75170 966 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 SYF2O95926 243 aaKnown RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 RHOXF2BP0C7M4 288 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 RFX5P48382 616 aaPredicted RBP13.55□□□□□ -0.24
TP53-220ENST00000610623 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 RHOXF2Q9BQY4 288 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
TP53-220ENST00000610623 AKR1B15C9JRZ8 316 aaPredicted RBP13.54□□□□□ -0.24
TP53-220ENST00000610623 EXOC5O00471 708 aa13.54□□□□□ -0.24
TP53-220ENST00000610623 ZNF18P17022 549 aa13.54□□□□□ -0.24
TP53-220ENST00000610623 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
TP53-220ENST00000610623 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
TP53-220ENST00000610623 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.54□□□□□ -0.24
TP53-220ENST00000610623 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 EBAG9O00559 213 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 PTCD1O75127 700 aaKnown RBP13.53□□□□□ -0.24
TP53-220ENST00000610623 MNAT1P51948 309 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 BANK1Q8NDB2 785 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 RAI14Q9P0K7 980 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 MROH7-TTC4A0A0A0MT08 1334 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 HNRNPH1P31943 449 aaKnown RBP13.53□□□□□ -0.24
TP53-220ENST00000610623 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
TP53-220ENST00000610623 PNOCQ13519 176 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 CCDC129Q6ZRS4 1044 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
TP53-220ENST00000610623 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
TP53-220ENST00000610623 TTF2Q9UNY4 1162 aaKnown RBP13.53□□□□□ -0.24
TP53-220ENST00000610623 A1BGP04217 495 aa13.52□□□□□ -0.24
TP53-220ENST00000610623 NR1I3Q14994 352 aa13.52□□□□□ -0.24
TP53-220ENST00000610623 CCDC102BQ68D86 513 aa13.52□□□□□ -0.24
TP53-220ENST00000610623 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.24
TP53-220ENST00000610623 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 CCDC148Q8NFR7 591 aa13.52□□□□□ -0.24
TP53-220ENST00000610623 SMARCC1Q92922 1105 aaPredicted RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 NAPGQ99747 312 aaPredicted RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 A1CFQ9NQ94 594 aaKnown RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 HOOK1Q9UJC3 728 aaKnown RBP13.52□□□□□ -0.24
TP53-220ENST00000610623 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
TP53-220ENST00000610623 SOWAHDA6NJG2 315 aa13.52□□□□□ -0.25
TP53-220ENST00000610623 MTF1Q14872 753 aa13.52□□□□□ -0.25
TP53-220ENST00000610623 KAT2BQ92831 832 aa13.52□□□□□ -0.25
TP53-220ENST00000610623 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
TP53-220ENST00000610623 E7EWF7 191 aa13.51□□□□□ -0.25
TP53-220ENST00000610623 MLKLQ8NB16 471 aa13.51□□□□□ -0.25
TP53-220ENST00000610623 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
TP53-220ENST00000610623 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
TP53-220ENST00000610623 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms