RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 HMGCRP04035 888 aa17■□□□□ 0.31
MUC1-222ENST00000610468 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
MUC1-222ENST00000610468 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
MUC1-222ENST00000610468 CERS3Q8IU89 383 aa17■□□□□ 0.31
MUC1-222ENST00000610468 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
MUC1-222ENST00000610468 XRN2Q9H0D6 950 aaKnown RBP eCLIP17■□□□□ 0.31
MUC1-222ENST00000610468 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
MUC1-222ENST00000610468 NR2E3Q9Y5X4 410 aa17■□□□□ 0.31
MUC1-222ENST00000610468 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
MUC1-222ENST00000610468 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
MUC1-222ENST00000610468 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
MUC1-222ENST00000610468 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
MUC1-222ENST00000610468 CRACR2BQ8N4Y2 399 aaPredicted RBP16.99■□□□□ 0.31
MUC1-222ENST00000610468 TMOD4Q9NZQ9 345 aa16.99■□□□□ 0.31
MUC1-222ENST00000610468 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
MUC1-222ENST00000610468 USP17L10C9JJH3 530 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 GDF11O95390 407 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 HLA-DOAP06340 250 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 CYP7A1P22680 504 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 HERVK_113P62684 666 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 DYNLL1P63167 89 aaKnown RBP16.98■□□□□ 0.31
MUC1-222ENST00000610468 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
MUC1-222ENST00000610468 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 CCDC8Q9H0W5 538 aaPredicted RBP16.98■□□□□ 0.31
MUC1-222ENST00000610468 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 SAP30BPQ9UHR5 308 aaKnown RBP16.98■□□□□ 0.31
MUC1-222ENST00000610468 SZT2Q5T011 3432 aa16.98■□□□□ 0.31
MUC1-222ENST00000610468 IDH1O75874 414 aaKnown RBP16.97■□□□□ 0.31
MUC1-222ENST00000610468 XRCC5P13010 732 aaKnown RBP16.97■□□□□ 0.31
MUC1-222ENST00000610468 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 TATDN1Q6P1N9 297 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 ANKLE1Q8NAG6 615 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
MUC1-222ENST00000610468 EHD4Q9H223 541 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 RBPJLQ9UBG7 517 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
MUC1-222ENST00000610468 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 POTEEQ6S8J3 1075 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 SOCS4Q8WXH5 440 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 TRIB2Q92519 343 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 C12orf42Q96LP6 360 aa16.96■□□□□ 0.31
MUC1-222ENST00000610468 EVI5O60447 810 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 GH2P01242 217 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 MAPK4P31152 587 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 TRIM32Q13049 653 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 NECAB2Q7Z6G3 386 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 DIS3LQ8TF46 1054 aaKnown RBP16.95■□□□□ 0.3
MUC1-222ENST00000610468 PAWRQ96IZ0 340 aaKnown RBP16.95■□□□□ 0.3
MUC1-222ENST00000610468 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 HMX1Q9NP08 348 aaPredicted RBP16.95■□□□□ 0.3
MUC1-222ENST00000610468 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
MUC1-222ENST00000610468 A0A1W2PPC1 479 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 PEX10O60683 326 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
MUC1-222ENST00000610468 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 USP6NLQ92738 828 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 RIOK1Q9BRS2 568 aaKnown RBP16.94■□□□□ 0.3
MUC1-222ENST00000610468 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 NDUFB9Q9Y6M9 179 aa16.94■□□□□ 0.3
MUC1-222ENST00000610468 USP5P45974 858 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 ERVK-24P63145 666 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 Q3C1V9 767 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 AACSQ86V21 672 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 TRMT44Q8IYL2 757 aaKnown RBP16.93■□□□□ 0.3
MUC1-222ENST00000610468 NUDT12Q9BQG2 462 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 KIAA1683Q9H0B3 1180 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 OGDHLQ9ULD0 1010 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 LAMA3Q16787 3333 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
MUC1-222ENST00000610468 PRKAR2AP13861 404 aaKnown RBP16.92■□□□□ 0.3
MUC1-222ENST00000610468 CYP2B6P20813 491 aa16.92■□□□□ 0.3
MUC1-222ENST00000610468 MORN1Q5T089 497 aa16.92■□□□□ 0.3
MUC1-222ENST00000610468 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
MUC1-222ENST00000610468 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
MUC1-222ENST00000610468 PORCNQ9H237 461 aa16.92■□□□□ 0.3
MUC1-222ENST00000610468 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 SHMT1P34896 483 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 LBX2Q6XYB7 198 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 GPR142Q7Z601 462 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 PANK1Q8TE04 598 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
MUC1-222ENST00000610468 DDX60LQ5H9U9 1706 aaKnown RBP16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
MUC1-222ENST00000610468 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms