RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 NDUFB9Q9Y6M9 179 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 SIPA1L1O43166 1804 aa16.35■□□□□ 0.21
POLR2J3-219ENST00000608621 C19orf81C9J6K1 198 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 USP17L10C9JJH3 530 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 HOXA7P31268 230 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 GINM1Q9NU53 330 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
POLR2J3-219ENST00000608621 LOC285556D6RIA3 1793 aa16.33■□□□□ 0.21
POLR2J3-219ENST00000608621 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
POLR2J3-219ENST00000608621 CHRDL2Q6WN34 429 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 PANK1Q8TE04 598 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 PAK6Q9NQU5 681 aaPredicted RBP16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 MORF4L1Q9UBU8 362 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.2
POLR2J3-219ENST00000608621 PEX10O60683 326 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 CAPN2P17655 700 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 USP5P45974 858 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 MAST2Q6P0Q8 1798 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 AACSQ86V21 672 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
POLR2J3-219ENST00000608621 HERVK_113P62684 666 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 EMILIN3Q9NT22 766 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
POLR2J3-219ENST00000608621 GH2P01242 217 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 HMGCRP04035 888 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 TRIM32Q13049 653 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 Q3C1V9 767 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
POLR2J3-219ENST00000608621 MYH1P12882 1939 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 RPTORQ8N122 1335 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 CYP2B6P20813 491 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
POLR2J3-219ENST00000608621 EVI5O60447 810 aa16.28■□□□□ 0.2
POLR2J3-219ENST00000608621 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
POLR2J3-219ENST00000608621 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
POLR2J3-219ENST00000608621 SERPINB13Q9UIV8 391 aa16.28■□□□□ 0.2
POLR2J3-219ENST00000608621 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 PLCD1P51178 756 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 ERVK-24P63145 666 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 ZYXQ15942 572 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 NECAB2Q7Z6G3 386 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 TRIB2Q92519 343 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 PAGR1Q9BTK6 254 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 EHD4Q9H223 541 aa16.27■□□□□ 0.2
POLR2J3-219ENST00000608621 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 MAGEB6P1A0A0J9YX57 407 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 APBB1O00213 710 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 MS4A1P11836 297 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 MAPK4P31152 587 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 BCL11AQ9H165 835 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 PORCNQ9H237 461 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 XRCC5P13010 732 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
POLR2J3-219ENST00000608621 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms