RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 SEMA3GQ9NS98 782 aa9.2□□□□□ -0.94
LINC00458-206ENST00000607494 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
LINC00458-206ENST00000607494 H3BS24 57 aa9.19□□□□□ -0.94
LINC00458-206ENST00000607494 FARP2O94887 1054 aaPredicted RBP9.19□□□□□ -0.94
LINC00458-206ENST00000607494 MAP3K11Q16584 847 aa9.19□□□□□ -0.94
LINC00458-206ENST00000607494 SV2BQ7L1I2 683 aa9.19□□□□□ -0.94
LINC00458-206ENST00000607494 HDXQ7Z353 690 aa9.19□□□□□ -0.94
LINC00458-206ENST00000607494 ZSWIM9Q86XI8 627 aa9.19□□□□□ -0.94
LINC00458-206ENST00000607494 ZNF503-AS2A6NEH8 195 aa9.18□□□□□ -0.94
LINC00458-206ENST00000607494 GRK4P32298 578 aa9.18□□□□□ -0.94
LINC00458-206ENST00000607494 PRAMEF13Q5VWM6 474 aa9.18□□□□□ -0.94
LINC00458-206ENST00000607494 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
LINC00458-206ENST00000607494 MFSD4AQ8N468 514 aa9.18□□□□□ -0.94
LINC00458-206ENST00000607494 FAM155AB1AL88 458 aaPredicted RBP9.17□□□□□ -0.94
LINC00458-206ENST00000607494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.17□□□□□ -0.94
LINC00458-206ENST00000607494 GNA15P30679 374 aa9.17□□□□□ -0.94
LINC00458-206ENST00000607494 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
LINC00458-206ENST00000607494 KCNMB1Q16558 191 aa9.17□□□□□ -0.94
LINC00458-206ENST00000607494 SFRP5Q5T4F7 317 aa9.17□□□□□ -0.94
LINC00458-206ENST00000607494 LIN37Q96GY3 246 aaPredicted RBP9.17□□□□□ -0.94
LINC00458-206ENST00000607494 DPH2Q9BQC3 489 aaPredicted RBP9.17□□□□□ -0.94
LINC00458-206ENST00000607494 LRRC10BA6NIK2 292 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 CBX7O95931 251 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 ZNF865P0CJ78 1059 aaPredicted RBP9.16□□□□□ -0.94
LINC00458-206ENST00000607494 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
LINC00458-206ENST00000607494 MESP2Q0VG99 397 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 MLANAQ16655 118 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 LETMD1Q6P1Q0 360 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 CAPN6Q9Y6Q1 641 aa9.16□□□□□ -0.94
LINC00458-206ENST00000607494 HID1Q8IV36 788 aa9.15□□□□□ -0.94
LINC00458-206ENST00000607494 KRTAP4-7Q9BYR0 210 aa9.15□□□□□ -0.94
LINC00458-206ENST00000607494 ST14Q9Y5Y6 855 aa9.15□□□□□ -0.94
LINC00458-206ENST00000607494 MEI1Q5TIA1 1274 aa9.14□□□□□ -0.95
LINC00458-206ENST00000607494 KSR1Q8IVT5 923 aa9.14□□□□□ -0.95
LINC00458-206ENST00000607494 DUSP9Q99956 384 aaKnown RBP9.14□□□□□ -0.95
LINC00458-206ENST00000607494 SNCAIPQ9Y6H5 919 aa9.14□□□□□ -0.95
LINC00458-206ENST00000607494 CST3P01034 146 aaPredicted RBP9.13□□□□□ -0.95
LINC00458-206ENST00000607494 CAP2P40123 477 aa9.13□□□□□ -0.95
LINC00458-206ENST00000607494 C22orf34Q6ZV56 151 aa9.13□□□□□ -0.95
LINC00458-206ENST00000607494 CDH24Q86UP0 819 aa9.13□□□□□ -0.95
LINC00458-206ENST00000607494 MFSD2AQ8NA29 543 aa9.13□□□□□ -0.95
LINC00458-206ENST00000607494 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
LINC00458-206ENST00000607494 GFRA2O00451 464 aa9.12□□□□□ -0.95
LINC00458-206ENST00000607494 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
LINC00458-206ENST00000607494 RBM25P49756 843 aaKnown RBP9.12□□□□□ -0.95
LINC00458-206ENST00000607494 LIG3P49916 1009 aa9.12□□□□□ -0.95
LINC00458-206ENST00000607494 TJP2Q9UDY2 1190 aa9.12□□□□□ -0.95
LINC00458-206ENST00000607494 LCE4AQ5TA78 99 aa9.11□□□□□ -0.95
LINC00458-206ENST00000607494 LMCD1Q9NZU5 365 aa9.11□□□□□ -0.95
LINC00458-206ENST00000607494 AK5Q9Y6K8 562 aa9.11□□□□□ -0.95
LINC00458-206ENST00000607494 ANKRD33BA6NCL7 494 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 WASH4PA8MWX3 477 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 TFE3P19532 575 aaPredicted RBP9.1□□□□□ -0.95
LINC00458-206ENST00000607494 LMNB1P20700 586 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 RPS26P62854 115 aaKnown RBP9.1□□□□□ -0.95
LINC00458-206ENST00000607494 TNK2Q07912 1038 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 PKN1Q16512 942 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 AGMOQ6ZNB7 445 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 PRR23BQ6ZRT6 265 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 SND1Q7KZF4 910 aaKnown RBP eCLIP9.1□□□□□ -0.95
LINC00458-206ENST00000607494 UBE2FQ969M7 185 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 KIRREL1Q96J84 757 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 ZSWIM5Q9P217 1185 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 TLR6Q9Y2C9 796 aa9.1□□□□□ -0.95
LINC00458-206ENST00000607494 PGRP06401 933 aa9.09□□□□□ -0.95
LINC00458-206ENST00000607494 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
LINC00458-206ENST00000607494 SPOCD1Q6ZMY3 1216 aa9.09□□□□□ -0.95
LINC00458-206ENST00000607494 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
LINC00458-206ENST00000607494 FAM84AQ96KN4 292 aa9.09□□□□□ -0.95
LINC00458-206ENST00000607494 SLC38A3Q99624 504 aa9.09□□□□□ -0.95
LINC00458-206ENST00000607494 F6X3S4 739 aa9.08□□□□□ -0.96
LINC00458-206ENST00000607494 AFMP43652 599 aa9.08□□□□□ -0.96
LINC00458-206ENST00000607494 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
LINC00458-206ENST00000607494 TMEM87BQ96K49 555 aa9.08□□□□□ -0.96
LINC00458-206ENST00000607494 GLI1P08151 1106 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 MPZL3Q6UWV2 235 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 MRPL41Q8IXM3 137 aaKnown RBP9.07□□□□□ -0.96
LINC00458-206ENST00000607494 MIR1-1HGQ9H1L0 117 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 KCNK12Q9HB15 430 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 SLAMF8Q9P0V8 285 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 CORINQ9Y5Q5 1042 aa9.07□□□□□ -0.96
LINC00458-206ENST00000607494 DNAJC25-GNG10A0A024R161 153 aa9.06□□□□□ -0.96
LINC00458-206ENST00000607494 RALGPS1Q5JS13 557 aa9.06□□□□□ -0.96
LINC00458-206ENST00000607494 ZNF746Q6NUN9 644 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-206ENST00000607494 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
LINC00458-206ENST00000607494 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
LINC00458-206ENST00000607494 GDNFP39905 211 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 ERVFC1P60507 584 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 THAP5Q7Z6K1 395 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 CILP2Q8IUL8 1156 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 DNAJB8Q8NHS0 232 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 ACSF2Q96CM8 615 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-206ENST00000607494 Q96M66 194 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 ALPK1Q96QP1 1244 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
LINC00458-206ENST00000607494 E9PSI1 815 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms