RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CYP2B6P20813 491 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 DYNLL1P63167 89 aaKnown RBP18.15■□□□□ 0.5
CTSA-216ENST00000607212 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 NECAB2Q7Z6G3 386 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 UBE2Q1Q7Z7E8 422 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 FEZ1Q99689 392 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 PAGR1Q9BTK6 254 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 WDR18Q9BV38 432 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
CTSA-216ENST00000607212 HMX1Q9NP08 348 aaPredicted RBP18.15■□□□□ 0.5
CTSA-216ENST00000607212 PIH1D3Q9NQM4 214 aaKnown RBP18.15■□□□□ 0.5
CTSA-216ENST00000607212 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
CTSA-216ENST00000607212 C19orf81C9J6K1 198 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 USP17L10C9JJH3 530 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 CAPN2P17655 700 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 PPP4CP60510 307 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 MIGA1Q8NAN2 632 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 GPRC5AQ8NFJ5 357 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
CTSA-216ENST00000607212 ZBTB21Q9ULJ3 1066 aa18.14■□□□□ 0.49
CTSA-216ENST00000607212 HERVK_113P62684 666 aa18.13■□□□□ 0.49
CTSA-216ENST00000607212 ZYXQ15942 572 aaKnown RBP18.13■□□□□ 0.49
CTSA-216ENST00000607212 SHROOM1Q2M3G4 852 aaPredicted RBP18.13■□□□□ 0.49
CTSA-216ENST00000607212 MAGEB6Q8N7X4 407 aa18.13■□□□□ 0.49
CTSA-216ENST00000607212 NUDT12Q9BQG2 462 aa18.13■□□□□ 0.49
CTSA-216ENST00000607212 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
CTSA-216ENST00000607212 PEX10O60683 326 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 TRIM32Q13049 653 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 C7orf61Q8IZ16 206 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 DIS3LQ8TF46 1054 aaKnown RBP18.12■□□□□ 0.49
CTSA-216ENST00000607212 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 GINM1Q9NU53 330 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 MORF4L1Q9UBU8 362 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 DBNLQ9UJU6 430 aaKnown RBP18.12■□□□□ 0.49
CTSA-216ENST00000607212 RPTORQ8N122 1335 aa18.12■□□□□ 0.49
CTSA-216ENST00000607212 GH2P01242 217 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 MAP3K12Q12852 859 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 WDR78Q5VTH9 848 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 USP17L2Q6R6M4 530 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 SOCS4Q8WXH5 440 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
CTSA-216ENST00000607212 CRISPLD2Q9H0B8 497 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 NDUFB9Q9Y6M9 179 aa18.11■□□□□ 0.49
CTSA-216ENST00000607212 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
CTSA-216ENST00000607212 MAPK4P31152 587 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 HOXA7P31268 230 aaPredicted RBP18.1■□□□□ 0.49
CTSA-216ENST00000607212 JAG1P78504 1218 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 AACSQ86V21 672 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
CTSA-216ENST00000607212 TRIB2Q92519 343 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
CTSA-216ENST00000607212 GJD2Q9UKL4 321 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 ALPK3Q96L96 1907 aa18.1■□□□□ 0.49
CTSA-216ENST00000607212 PLXNB2O15031 1838 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
CTSA-216ENST00000607212 ERVK-9P63128 1117 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 ERVK-24P63145 666 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 NBPF3Q9H094 633 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 STAP2Q9UGK3 403 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 ZMYND8Q9ULU4 1186 aaPredicted RBP18.09■□□□□ 0.49
CTSA-216ENST00000607212 EXOC6BQ9Y2D4 811 aa18.09■□□□□ 0.49
CTSA-216ENST00000607212 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
CTSA-216ENST00000607212 DDX60LQ5H9U9 1706 aaKnown RBP18.09■□□□□ 0.49
CTSA-216ENST00000607212 APBB1O00213 710 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 IGSF3O75054 1194 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 POLR3DP05423 398 aaPredicted RBP18.08■□□□□ 0.48
CTSA-216ENST00000607212 RGS2P41220 211 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 TTC6Q86TZ1 520 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 C11orf49Q9H6J7 331 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.48
CTSA-216ENST00000607212 RLBP1P12271 317 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 USP14P54578 494 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 CERKLQ49MI3 558 aaPredicted RBP18.07■□□□□ 0.48
CTSA-216ENST00000607212 PLEKHH3Q7Z736 793 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 TRMT44Q8IYL2 757 aaKnown RBP18.07■□□□□ 0.48
CTSA-216ENST00000607212 ANTXR1Q9H6X2 564 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 RBPJLQ9UBG7 517 aa18.07■□□□□ 0.48
CTSA-216ENST00000607212 NAV1Q8NEY1 1877 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L15C9J2P7 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L13C9JLJ4 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L11C9JVI0 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L18D6R9N7 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L22D6RA61 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L17D6RBQ6 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L19D6RCP7 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L20D6RJB6 530 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
CTSA-216ENST00000607212 GLRX3O76003 335 aaKnown RBP18.06■□□□□ 0.48
CTSA-216ENST00000607212 CCNA1P78396 465 aa18.06■□□□□ 0.48
CTSA-216ENST00000607212 USP17L24Q0WX57 530 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms