RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	XAGE3	Q8WTP9	111 aa		7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	SLC38A3	Q99624	504 aa		7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	ATP13A1	Q9HD20	1204 aa		7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	SEMA3G	Q9NS98	782 aa		7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	LMCD1	Q9NZU5	365 aa		7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.11	□□□□□ -1.27
LAMA4-222	ENST00000604740	PRPF40A	O75400	957 aa	Known RBP	7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	CBX7	O95931	251 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	CAP2	P40123	477 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	MAP3K11	Q16584	847 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	C22orf34	Q6ZV56	151 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	RIN3	Q8TB24	985 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	PCDHB5	Q9Y5E4	795 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	CAPN6	Q9Y6Q1	641 aa		7.1	□□□□□ -1.27
LAMA4-222	ENST00000604740	AFM	P43652	599 aa		7.09	□□□□□ -1.27
LAMA4-222	ENST00000604740	RPS26	P62854	115 aa	Known RBP	7.09	□□□□□ -1.27
LAMA4-222	ENST00000604740	MLANA	Q16655	118 aa		7.09	□□□□□ -1.27
LAMA4-222	ENST00000604740	ZNF503-AS2	A6NEH8	195 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	DBX1	A6NMT0	343 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	CST3	P01034	146 aa	Predicted RBP	7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	FYB2	Q5VWT5	728 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	NPAS4	Q8IUM7	802 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	LIN37	Q96GY3	246 aa	Predicted RBP	7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	DUSP9	Q99956	384 aa	Known RBP	7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	DPH2	Q9BQC3	489 aa	Predicted RBP	7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	RNF19A	Q9NV58	838 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	FAM53C	Q9NYF3	392 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	AK5	Q9Y6K8	562 aa		7.08	□□□□□ -1.28
LAMA4-222	ENST00000604740	PATL2	C9JE40	543 aa	Known RBP	7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	CYP7A1	P22680	504 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	LIG3	P49916	1009 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	MESP2	Q0VG99	397 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	KIRREL1	Q96J84	757 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	FAM84A	Q96KN4	292 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	MIR1-1HG	Q9H1L0	117 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	ST14	Q9Y5Y6	855 aa		7.07	□□□□□ -1.28
LAMA4-222	ENST00000604740	GFRA2	O00451	464 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	PGR	P06401	933 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	MPZL3	Q6UWV2	235 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	AGMO	Q6ZNB7	445 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	THAP5	Q7Z6K1	395 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	CDH24	Q86UP0	819 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	UBE2F	Q969M7	185 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	TRAIP	Q9BWF2	469 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	ZSWIM5	Q9P217	1185 aa		7.06	□□□□□ -1.28
LAMA4-222	ENST00000604740	ANKRD33B	A6NCL7	494 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	RBAK-RBAKDN	I3L0D1	243 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	GLI1	P08151	1106 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	KIR3DL1	P43629	444 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	EAPP	Q56P03	285 aa	Predicted RBP	7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	MEI1	Q5TIA1	1274 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	COX4I2	Q96KJ9	171 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	C19orf73	Q9NVV2	129 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	TJP2	Q9UDY2	1190 aa		7.05	□□□□□ -1.28
LAMA4-222	ENST00000604740	TFE3	P19532	575 aa	Predicted RBP	7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	GDNF	P39905	211 aa		7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	TNK2	Q07912	1038 aa		7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	MRPL41	Q8IXM3	137 aa	Known RBP	7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	TMEM87B	Q96K49	555 aa		7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	SLAMF8	Q9P0V8	285 aa		7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	TACC3	Q9Y6A5	838 aa		7.04	□□□□□ -1.28
LAMA4-222	ENST00000604740	PDE4B	Q07343	736 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	TSNAXIP1	Q2TAA8	658 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	TMEM67	Q5HYA8	995 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	LCE1D	Q5T752	114 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	SLC6A19	Q695T7	634 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	PRR23B	Q6ZRT6	265 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	JARID2	Q92833	1246 aa	Predicted RBP	7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	CCDC120	Q96HB5	630 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	ALPK1	Q96QP1	1244 aa		7.03	□□□□□ -1.28
LAMA4-222	ENST00000604740	ETV3	P41162	512 aa		7.02	□□□□□ -1.29
LAMA4-222	ENST00000604740	RPL6	Q02878	288 aa	Known RBP	7.02	□□□□□ -1.29
LAMA4-222	ENST00000604740	TLR6	Q9Y2C9	796 aa		7.02	□□□□□ -1.29
LAMA4-222	ENST00000604740	PSMD2	Q13200	908 aa		7.01	□□□□□ -1.29
LAMA4-222	ENST00000604740	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.01	□□□□□ -1.29
LAMA4-222	ENST00000604740	PIWIL2	Q8TC59	973 aa	Known RBP	7.01	□□□□□ -1.29
LAMA4-222	ENST00000604740	PARP2	Q9UGN5	583 aa		7.01	□□□□□ -1.29
LAMA4-222	ENST00000604740	RLBP1	P12271	317 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	RAC2	P15153	192 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	RAP1GAP	P47736	663 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	DIEXF	Q68CQ4	756 aa	Known RBP	7	□□□□□ -1.29
LAMA4-222	ENST00000604740	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7	□□□□□ -1.29
LAMA4-222	ENST00000604740	TTC6	Q86TZ1	520 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	MCAT	Q8IVS2	390 aa	Known RBP	7	□□□□□ -1.29
LAMA4-222	ENST00000604740	ACSF2	Q96CM8	615 aa	Predicted RBP	7	□□□□□ -1.29
LAMA4-222	ENST00000604740	PPP1R16B	Q96T49	567 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	ADAM30	Q9UKF2	790 aa		7	□□□□□ -1.29
LAMA4-222	ENST00000604740	DNAJC25-GNG10	A0A024R161	153 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	TAF1C	Q15572	869 aa	Predicted RBP	6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	RALGPS1	Q5JS13	557 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	SPOCD1	Q6ZMY3	1216 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	SYDE1	Q6ZW31	735 aa	Predicted RBP	6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	TMPRSS7	Q7RTY8	843 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	CREG2	Q8IUH2	290 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	DNAJB8	Q8NHS0	232 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740		Q96M66	194 aa		6.99	□□□□□ -1.29

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