RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 TMOD4Q9NZQ9 345 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 STAP2Q9UGK3 403 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 TRIM17Q9Y577 477 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 OSBPP22059 807 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 BACE1P56817 501 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 SH3D19Q5HYK7 790 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 CD99L2Q8TCZ2 262 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
CCDC12-209ENST00000604164 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 MYH1P12882 1939 aa13.87□□□□□ -0.19
CCDC12-209ENST00000604164 GDF11O95390 407 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 GH2P01242 217 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 HOXD10P28358 340 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 PLCD1P51178 756 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 PDE1AP54750 535 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 PRMT2P55345 433 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
CCDC12-209ENST00000604164 RRP1BQ14684 758 aaKnown RBP13.86□□□□□ -0.19
CCDC12-209ENST00000604164 C17orf99Q6UX52 265 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 OTOP1Q7RTM1 612 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 PUS7LQ9H0K6 701 aaKnown RBP13.86□□□□□ -0.19
CCDC12-209ENST00000604164 ARPP21Q9UBL0 812 aaPredicted RBP13.86□□□□□ -0.19
CCDC12-209ENST00000604164 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 MYH7P12883 1935 aa13.86□□□□□ -0.19
CCDC12-209ENST00000604164 USP14P54578 494 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 HMGCS2P54868 508 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 GABPAQ06546 454 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 MTMR2Q13614 643 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
CCDC12-209ENST00000604164 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 STRBPQ96SI9 672 aaKnown RBP13.85□□□□□ -0.19
CCDC12-209ENST00000604164 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
CCDC12-209ENST00000604164 HPS5Q9UPZ3 1129 aa13.85□□□□□ -0.19
CCDC12-209ENST00000604164 NAV1Q8NEY1 1877 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 USP17L12C9JPN9 530 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 USP17L21D6R901 530 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 PRKAB2O43741 272 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 SHMT1P34896 483 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 GCLCP48506 637 aaPredicted RBP13.84□□□□□ -0.19
CCDC12-209ENST00000604164 NUCB1Q02818 461 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 RAB3GAP1Q15042 981 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
CCDC12-209ENST00000604164 GTF3C2Q8WUA4 911 aaPredicted RBP13.84□□□□□ -0.19
CCDC12-209ENST00000604164 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 FEZ1Q99689 392 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 SIPA1L1O43166 1804 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 ADGRA2Q96PE1 1338 aa13.84□□□□□ -0.19
CCDC12-209ENST00000604164 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.2
CCDC12-209ENST00000604164 GPAA1O43292 621 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 APPP05067 770 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 CYP2C8P10632 490 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
CCDC12-209ENST00000604164 FCGRTP55899 365 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
CCDC12-209ENST00000604164 SBK1Q52WX2 424 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 TMEM179Q6ZVK1 233 aa13.83□□□□□ -0.2
CCDC12-209ENST00000604164 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.2
CCDC12-209ENST00000604164 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
CCDC12-209ENST00000604164 IGHDP01880 384 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 BCRP11274 1271 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 TDO2P48775 406 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 ZMYM1Q5SVZ6 1142 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 C16orf86Q6ZW13 317 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 KIAA1683Q9H0B3 1180 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
CCDC12-209ENST00000604164 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
CCDC12-209ENST00000604164 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
CCDC12-209ENST00000604164 CYP2D6P10635 497 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 PSMC4P43686 418 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 CDK8P49336 464 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 JAG1P78504 1218 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 FAM110CQ1W6H9 321 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 ASCC2Q9H1I8 757 aaPredicted RBP13.81□□□□□ -0.2
CCDC12-209ENST00000604164 OSBPL3Q9H4L5 887 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 ARHGEF10LQ9HCE6 1279 aa13.81□□□□□ -0.2
CCDC12-209ENST00000604164 PTPRFP10586 1907 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms