RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 ZBTB21Q9ULJ3 1066 aa28.37■■■□□ 2.13
GTPBP3-227ENST00000602056 MGAMO43451 1857 aa28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 SGPL1O95470 568 aa28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 ERC1Q8IUD2 1116 aa28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 P2RX7Q99572 595 aaKnown RBP28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 IL1RAPL2Q9NP60 686 aa28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 TAOK2Q9UL54 1235 aa28.36■■■□□ 2.13
GTPBP3-227ENST00000602056 HOXA7P31268 230 aaPredicted RBP28.35■■■□□ 2.13
GTPBP3-227ENST00000602056 RHPN1Q8TCX5 695 aa28.35■■■□□ 2.13
GTPBP3-227ENST00000602056 TRIM34Q9BYJ4 488 aa28.35■■■□□ 2.13
GTPBP3-227ENST00000602056 GINM1Q9NU53 330 aa28.35■■■□□ 2.13
GTPBP3-227ENST00000602056 MORF4L1Q9UBU8 362 aa28.35■■■□□ 2.13
GTPBP3-227ENST00000602056 HLA-DOAP06340 250 aa28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 TXNRD2Q9NNW7 524 aa28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 PAK6Q9NQU5 681 aaPredicted RBP28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 TMOD4Q9NZQ9 345 aa28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 CEP290O15078 2479 aa28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 MYO5AQ9Y4I1 1855 aaKnown RBP28.34■■■□□ 2.13
GTPBP3-227ENST00000602056 C19orf81C9J6K1 198 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 USP17L10C9JJH3 530 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 FARP2O94887 1054 aaPredicted RBP28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 POTEEQ6S8J3 1075 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 SIRT2Q8IXJ6 389 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 DPF3Q92784 378 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 EMILIN3Q9NT22 766 aa28.33■■■□□ 2.13
GTPBP3-227ENST00000602056 ATAD5Q96QE3 1844 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 GH2P01242 217 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 USP5P45974 858 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 FXR1P51114 621 aaKnown RBP eCLIP28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 IRX3P78415 501 aaPredicted RBP28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 MAP3K12Q12852 859 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 TATDN1Q6P1N9 297 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 DEFB118Q96PH6 123 aa28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 RIOK1Q9BRS2 568 aaKnown RBP28.32■■■□□ 2.12
GTPBP3-227ENST00000602056 HERVK_113P62684 666 aa28.3■■■□□ 2.12
GTPBP3-227ENST00000602056 TRIM32Q13049 653 aa28.3■■■□□ 2.12
GTPBP3-227ENST00000602056 CERS3Q8IU89 383 aa28.3■■■□□ 2.12
GTPBP3-227ENST00000602056 CRISPLD2Q9H0B8 497 aa28.3■■■□□ 2.12
GTPBP3-227ENST00000602056 RBPJLQ9UBG7 517 aa28.3■■■□□ 2.12
GTPBP3-227ENST00000602056 CDK5RAP2Q96SN8 1893 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 HSP90AB4PQ58FF6 505 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 EHD4Q9H223 541 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 ZBTB40Q9NUA8 1239 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 DOCK3Q8IZD9 2030 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 FOCADQ5VW36 1801 aa28.29■■■□□ 2.12
GTPBP3-227ENST00000602056 TFRCP02786 760 aaKnown RBP28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 PLCD1P51178 756 aa28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 Q3C1V9 767 aa28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 TMED8Q6PL24 325 aaPredicted RBP28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 HTATIP2Q9BUP3 242 aa28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 SERPINB13Q9UIV8 391 aa28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 COG6Q9Y2V7 657 aa28.28■■■□□ 2.12
GTPBP3-227ENST00000602056 APBB1O00213 710 aa28.27■■■□□ 2.12
GTPBP3-227ENST00000602056 HMGCRP04035 888 aa28.27■■■□□ 2.12
GTPBP3-227ENST00000602056 GPRC5AQ8NFJ5 357 aa28.27■■■□□ 2.12
GTPBP3-227ENST00000602056 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.27■■■□□ 2.12
GTPBP3-227ENST00000602056 PDE6AP16499 860 aa28.26■■■□□ 2.11
GTPBP3-227ENST00000602056 EVX2Q03828 476 aa28.26■■■□□ 2.11
GTPBP3-227ENST00000602056 USP17L2Q6R6M4 530 aa28.26■■■□□ 2.11
GTPBP3-227ENST00000602056 CHRDL2Q6WN34 429 aa28.26■■■□□ 2.11
GTPBP3-227ENST00000602056 RPAP2Q8IXW5 612 aaPredicted RBP28.26■■■□□ 2.11
GTPBP3-227ENST00000602056 MS4A1P11836 297 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 SHMT1P34896 483 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 TTC6Q86TZ1 520 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 ACER1Q8TDN7 264 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 TRIB2Q92519 343 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 KIF1BPQ96EK5 621 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 C12orf42Q96LP6 360 aa28.25■■■□□ 2.11
GTPBP3-227ENST00000602056 MAGEB6P1A0A0J9YX57 407 aa28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 CYP2B6P20813 491 aa28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 ZYXQ15942 572 aaKnown RBP28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 CERKLQ49MI3 558 aaPredicted RBP28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 SLC9C2Q5TAH2 1124 aa28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 CLASRPQ8N2M8 674 aaKnown RBP28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 EDC3Q96F86 508 aaKnown RBP28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 PORCNQ9H237 461 aa28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 TRIOBPQ9H2D6 2365 aa28.24■■■□□ 2.11
GTPBP3-227ENST00000602056 TCRBV5S4A2TA0A5A2 114 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 GUCY1A2P33402 732 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 ERVK-9P63128 1117 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 ERVK-24P63145 666 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 GABPAQ06546 454 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 TTF1Q15361 905 aaPredicted RBP28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 DIS3LQ8TF46 1054 aaKnown RBP28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 DDX19BQ9UMR2 479 aa28.23■■■□□ 2.11
GTPBP3-227ENST00000602056 ZNF532Q9HCE3 1301 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 GOLIM4O00461 696 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 CAPN2P17655 700 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 RAB3GAP1Q15042 981 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 ABCB5Q2M3G0 1257 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 USP6NLQ92738 828 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 PAWRQ96IZ0 340 aaKnown RBP28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 DNAJC2Q99543 621 aaKnown RBP28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 PRO3102Q9H379 93 aa28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 RBM27Q9P2N5 1060 aaKnown RBP28.22■■■□□ 2.11
GTPBP3-227ENST00000602056 RPTORQ8N122 1335 aa28.21■■■□□ 2.11
GTPBP3-227ENST00000602056 CNMDO75829 334 aa28.21■■■□□ 2.11
GTPBP3-227ENST00000602056 FEZ1Q99689 392 aa28.21■■■□□ 2.11
GTPBP3-227ENST00000602056 PAGR1Q9BTK6 254 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms