RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 NAA16Q6N069 864 aaPredicted RBP6.36□□□□□ -1.39
VRK3-226ENST00000602029 GPR153Q6NV75 609 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 PI16Q6UXB8 463 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 ATF7IPQ6VMQ6 1270 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 SH3BP5LQ7L8J4 393 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 MAPKAPK5Q8IW41 473 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 GPRC5AQ8NFJ5 357 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 MEIS3Q99687 375 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 GDF15Q99988 308 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 NDUFB9Q9Y6M9 179 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 PIEZO1Q92508 2521 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
VRK3-226ENST00000602029 ASNSP08243 561 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 UQCRFS1P1P0C7P4 283 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CAPN2P17655 700 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CAP2P40123 477 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 RGS2P41220 211 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 USP5P45974 858 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CCNA1P78396 465 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 RAB3GAP1Q15042 981 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CCDC158Q5M9N0 1113 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 MFSD14CQ5VZR4 134 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 TDHQ8IZJ6 230 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 ANKLE1Q8NAG6 615 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 SH3RF3Q8TEJ3 882 aaPredicted RBP6.35□□□□□ -1.39
VRK3-226ENST00000602029 TGFBRAP1Q8WUH2 860 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 SOCS4Q8WXH5 440 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CLUAP1Q96AJ1 413 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 FAM122AQ96E09 287 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 CDCA7LQ96GN5 454 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 TBC1D2Q9BYX2 928 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 PAK6Q9NQU5 681 aaPredicted RBP6.35□□□□□ -1.39
VRK3-226ENST00000602029 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
VRK3-226ENST00000602029 HMG20BQ9P0W2 317 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 PI4KBQ9UBF8 816 aa6.35□□□□□ -1.39
VRK3-226ENST00000602029 HERC5Q9UII4 1024 aaKnown RBP6.35□□□□□ -1.39
VRK3-226ENST00000602029 DDX60LQ5H9U9 1706 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 GPR75-ASB3A0A0A6YYF3 556 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 USP17L10C9JJH3 530 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 MPHOSPH10O00566 681 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 IPO8O15397 1037 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 RAD21O60216 631 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 PEX10O60683 326 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 IDH1O75874 414 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 GNAI2P04899 355 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 MAPK4P31152 587 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 BACE1P56817 501 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 HERVK_113P62684 666 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 PLEKHH3Q7Z736 793 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 TRIB2Q92519 343 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 P2RX7Q99572 595 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 CRISPLD2Q9H0B8 497 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 DHX36Q9H2U1 1008 aaKnown RBP6.34□□□□□ -1.39
VRK3-226ENST00000602029 COPRSQ9NQ92 184 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 TSHZ2Q9NRE2 1034 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 PPP4R2Q9NY27 417 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 PALD1Q9ULE6 856 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 DNAH12Q6ZR08 3092 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 CACNA1AO00555 2505 aa6.34□□□□□ -1.39
VRK3-226ENST00000602029 DOCK2Q92608 1830 aa6.34□□□□□ -1.4
VRK3-226ENST00000602029 BDP1A6H8Y1 2624 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 ATRNL1Q5VV63 1379 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 MYH13Q9UKX3 1938 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
VRK3-226ENST00000602029 MUC6Q6W4X9 2439 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 C19orf81C9J6K1 198 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 TBC1D12O60347 775 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 MAP4K4O95819 1239 aaPredicted RBP6.33□□□□□ -1.4
VRK3-226ENST00000602029 CYP7A1P22680 504 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 CCND3P30281 292 aaPredicted RBP6.33□□□□□ -1.4
VRK3-226ENST00000602029 BMP8BP34820 402 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 RHBDL3P58872 404 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 ERVK-9P63128 1117 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 ERVK-24P63145 666 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 ATP2B2Q01814 1243 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 CACNB2Q08289 660 aaPredicted RBP6.33□□□□□ -1.4
VRK3-226ENST00000602029 PLS1Q14651 629 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 LRIT3Q3SXY7 679 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 USP17L2Q6R6M4 530 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 MIGA1Q8NAN2 632 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 NSUN4Q96CB9 384 aaKnown RBP6.33□□□□□ -1.4
VRK3-226ENST00000602029 APBA2Q99767 749 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 CABP5Q9NP86 173 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 ATP11BQ9Y2G3 1177 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 CACNA1FO60840 1977 aa6.33□□□□□ -1.4
VRK3-226ENST00000602029 FLT1P17948 1338 aa6.32□□□□□ -1.4
VRK3-226ENST00000602029 KBTBD13C9JR72 458 aa6.32□□□□□ -1.4
VRK3-226ENST00000602029 POTEB2H3BUK9 544 aa6.32□□□□□ -1.4
VRK3-226ENST00000602029 SURF6O75683 361 aaKnown RBP6.32□□□□□ -1.4
VRK3-226ENST00000602029 GH2P01242 217 aa6.32□□□□□ -1.4
VRK3-226ENST00000602029 POLR3DP05423 398 aaPredicted RBP6.32□□□□□ -1.4
VRK3-226ENST00000602029 MCAMP43121 646 aa6.32□□□□□ -1.4
VRK3-226ENST00000602029 CCL14Q16627 93 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms