RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	WNT10A	Q9GZT5	417 aa		7.84	□□□□□ -1.15
FARP1-238	ENST00000602015	C12orf49	Q9H741	205 aa		7.84	□□□□□ -1.15
FARP1-238	ENST00000602015	CARS2	Q9HA77	564 aa	Known RBP	7.84	□□□□□ -1.15
FARP1-238	ENST00000602015	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.84	□□□□□ -1.15
FARP1-238	ENST00000602015	PRAMEF27	A3QJZ7	478 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	TSPAN15	O95858	294 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	LRFN4	Q6PJG9	635 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	MPZL3	Q6UWV2	235 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	SPOCD1	Q6ZMY3	1216 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	HID1	Q8IV36	788 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	HSPA12B	Q96MM6	686 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	ASB16	Q96NS5	453 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	SEMA3G	Q9NS98	782 aa		7.83	□□□□□ -1.16
FARP1-238	ENST00000602015	SCRIB	Q14160	1630 aa		7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	ETF1	P62495	437 aa	Known RBP	7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	SLBP	Q14493	270 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	INPP5A	Q14642	412 aa		7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	MIPEP	Q99797	713 aa		7.82	□□□□□ -1.16
FARP1-238	ENST00000602015	CELA3A	P09093	270 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	KIR3DL1	P43629	444 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	RASIP1	Q5U651	963 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	CDKAL1	Q5VV42	579 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	PLPPR2	Q96GM1	343 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	LIN37	Q96GY3	246 aa	Predicted RBP	7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	ATP13A1	Q9HD20	1204 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	TACC3	Q9Y6A5	838 aa		7.81	□□□□□ -1.16
FARP1-238	ENST00000602015	USP17L7	P0C7H9	530 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	LMNB1	P20700	586 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	FYB2	Q5VWT5	728 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	LETMD1	Q6P1Q0	360 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	ANKLE2	Q86XL3	938 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	CAPN6	Q9Y6Q1	641 aa		7.8	□□□□□ -1.16
FARP1-238	ENST00000602015	RPS26	P62854	115 aa	Known RBP	7.79	□□□□□ -1.16
FARP1-238	ENST00000602015	FGD1	P98174	961 aa		7.79	□□□□□ -1.16
FARP1-238	ENST00000602015	FBRS	Q9HAH7	460 aa		7.79	□□□□□ -1.16
FARP1-238	ENST00000602015	TTF2	Q9UNY4	1162 aa	Known RBP	7.79	□□□□□ -1.16
FARP1-238	ENST00000602015	ST14	Q9Y5Y6	855 aa		7.79	□□□□□ -1.16
FARP1-238	ENST00000602015	PRR33	A8MZF0	331 aa		7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.78	□□□□□ -1.16
FARP1-238	ENST00000602015		H3BS24	57 aa		7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	CST3	P01034	146 aa	Predicted RBP	7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	RAC2	P15153	192 aa		7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	TTBK2	Q6IQ55	1244 aa		7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	ALPK1	Q96QP1	1244 aa		7.78	□□□□□ -1.16
FARP1-238	ENST00000602015	NFIB	O00712	420 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	PTPN11	Q06124	597 aa	Predicted RBP	7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	NKG7	Q16617	165 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	TMPRSS7	Q7RTY8	843 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	SIAH1	Q8IUQ4	282 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	PIWIL2	Q8TC59	973 aa	Known RBP	7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	GAL3ST3	Q96A11	431 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	WWC3	Q9ULE0	1092 aa		7.77	□□□□□ -1.17
FARP1-238	ENST00000602015	CBX7	O95931	251 aa		7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	DIEXF	Q68CQ4	756 aa	Known RBP	7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	PRR23B	Q6ZRT6	265 aa		7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	UBE2F	Q969M7	185 aa		7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	SETDB2	Q96T68	719 aa		7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	C19orf73	Q9NVV2	129 aa		7.76	□□□□□ -1.17
FARP1-238	ENST00000602015	NCAPD3	P42695	1498 aa		7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	EIF4B	P23588	611 aa	Known RBP	7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	GRK4	P32298	578 aa		7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	ETV3	P41162	512 aa		7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	PRAMEF13	Q5VWM6	474 aa		7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	CILP2	Q8IUL8	1156 aa		7.75	□□□□□ -1.17
FARP1-238	ENST00000602015	LDHB	P07195	334 aa	Known RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	CFP	P27918	469 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	GNA15	P30679	374 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	PDE4B	Q07343	736 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	KCNA1	Q09470	495 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	CCDC85B	Q15834	202 aa	Predicted RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	MRPL41	Q8IXM3	137 aa	Known RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	RIN3	Q8TB24	985 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	KRTAP4-9	Q9BYQ8	210 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	ZSWIM5	Q9P217	1185 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	CNTNAP4	Q9C0A0	1308 aa		7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.74	□□□□□ -1.17
FARP1-238	ENST00000602015	SUPT5H	O00267	1087 aa	Known RBP	7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	GFRA2	O00451	464 aa		7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	SLC6A19	Q695T7	634 aa		7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	TTC6	Q86TZ1	520 aa		7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	ABHD4	Q8TB40	342 aa		7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	NSUN3	Q9H649	340 aa	Known RBP	7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	SLAMF8	Q9P0V8	285 aa		7.73	□□□□□ -1.17
FARP1-238	ENST00000602015	TMEM253	P0C7T8	217 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	RLBP1	P12271	317 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	TNK2	Q07912	1038 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	XAGE3	Q8WTP9	111 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	EPB41L4B	Q9H329	900 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	TRIT1	Q9H3H1	467 aa	Known RBP	7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	IVNS1ABP	Q9Y6Y0	642 aa		7.72	□□□□□ -1.17
FARP1-238	ENST00000602015	PGR	P06401	933 aa		7.71	□□□□□ -1.18
FARP1-238	ENST00000602015	P4HB	P07237	508 aa	Known RBP	7.71	□□□□□ -1.18
FARP1-238	ENST00000602015	AGMO	Q6ZNB7	445 aa		7.71	□□□□□ -1.18
FARP1-238	ENST00000602015	CDH24	Q86UP0	819 aa		7.71	□□□□□ -1.18

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