RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 USP17L21D6R901 530 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
ZNF558-207ENST00000601372 ATP5JP18859 108 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 FNBP4Q8N3X1 1017 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-207ENST00000601372 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
ZNF558-207ENST00000601372 NR1I2O75469 434 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 AMPD3Q01432 767 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 PPARAQ07869 468 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 PLIN2Q99541 437 aa12.53□□□□□ -0.4
ZNF558-207ENST00000601372 H0YHG0 523 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 YEATS4O95619 227 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 GNA11P29992 359 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 PHKBQ93100 1093 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 COA1Q9GZY4 146 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 GRIN3BO60391 1043 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 ZNF75DP51815 510 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.4
ZNF558-207ENST00000601372 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.4
ZNF558-207ENST00000601372 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.4
ZNF558-207ENST00000601372 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.4
ZNF558-207ENST00000601372 CALML3P27482 149 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF558-207ENST00000601372 NSMFQ6X4W1 530 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 FRMPD2Q68DX3 1309 aaPredicted RBP12.52□□□□□ -0.41
ZNF558-207ENST00000601372 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF558-207ENST00000601372 E7EWF7 191 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
ZNF558-207ENST00000601372 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
ZNF558-207ENST00000601372 MCM7P33993 719 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 RC3H1Q5TC82 1133 aaKnown RBP12.51□□□□□ -0.41
ZNF558-207ENST00000601372 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 C2orf69Q8N8R5 385 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
ZNF558-207ENST00000601372 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 N4BP3O15049 544 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 LARGE1O95461 756 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
ZNF558-207ENST00000601372 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 PDE6AP16499 860 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 STAT6P42226 847 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
ZNF558-207ENST00000601372 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
ZNF558-207ENST00000601372 SEMA3EO15041 775 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 OSBPP22059 807 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
ZNF558-207ENST00000601372 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
ZNF558-207ENST00000601372 ITPK1Q13572 414 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
ZNF558-207ENST00000601372 SLC10A4Q96EP9 437 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 GPSM2P81274 684 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 BRIP1Q9BX63 1249 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 CHMP2AO43633 222 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 DDX39AO00148 427 aaKnown RBP12.5□□□□□ -0.41
ZNF558-207ENST00000601372 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 ARHGEF28Q8N1W1 1705 aaKnown RBP12.5□□□□□ -0.41
ZNF558-207ENST00000601372 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
ZNF558-207ENST00000601372 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 DYNLL1P63167 89 aaKnown RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 ZNF174Q15697 407 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 HAUS7Q99871 368 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 VWDEQ8N2E2 1590 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 GOLGA6L10A6NI86 522 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 CFBP00751 764 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 DESP17661 470 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 CDR1P51861 262 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 ICA1Q05084 483 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 ANO1Q5XXA6 986 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 CMTR1Q8N1G2 835 aaKnown RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 CELF1Q92879 486 aaKnown RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 FLOT1O75955 427 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 IFNL3Q8IZI9 196 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
ZNF558-207ENST00000601372 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
ZNF558-207ENST00000601372 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
ZNF558-207ENST00000601372 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
ZNF558-207ENST00000601372 ARHGEF6Q15052 776 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms