RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ANTXR1Q9H6X2 564 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 SAP30BPQ9UHR5 308 aaKnown RBP20.71■□□□□ 0.91
SCAF1-204ENST00000601038 NDUFB9Q9Y6M9 179 aa20.71■□□□□ 0.91
SCAF1-204ENST00000601038 DOCK3Q8IZD9 2030 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 ELNP15502 786 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.9
SCAF1-204ENST00000601038 RPAP2Q8IXW5 612 aaPredicted RBP20.7■□□□□ 0.9
SCAF1-204ENST00000601038 MIGA1Q8NAN2 632 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 UNC93B1Q9H1C4 597 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 TMOD4Q9NZQ9 345 aa20.7■□□□□ 0.9
SCAF1-204ENST00000601038 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
SCAF1-204ENST00000601038 USP5P45974 858 aa20.69■□□□□ 0.9
SCAF1-204ENST00000601038 IL1RAPL2Q9NP60 686 aa20.69■□□□□ 0.9
SCAF1-204ENST00000601038 ZBTB21Q9ULJ3 1066 aa20.69■□□□□ 0.9
SCAF1-204ENST00000601038 GDF11O95390 407 aa20.68■□□□□ 0.9
SCAF1-204ENST00000601038 INHAP05111 366 aa20.68■□□□□ 0.9
SCAF1-204ENST00000601038 UBE2Q1Q7Z7E8 422 aa20.68■□□□□ 0.9
SCAF1-204ENST00000601038 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
SCAF1-204ENST00000601038 DDX19BQ9UMR2 479 aa20.68■□□□□ 0.9
SCAF1-204ENST00000601038 HMMRO75330 724 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 SGPL1O95470 568 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 CAPN2P17655 700 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
SCAF1-204ENST00000601038 TTF1Q15361 905 aaPredicted RBP20.67■□□□□ 0.9
SCAF1-204ENST00000601038 SHROOM1Q2M3G4 852 aaPredicted RBP20.67■□□□□ 0.9
SCAF1-204ENST00000601038 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
SCAF1-204ENST00000601038 EHD4Q9H223 541 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 ZBTB40Q9NUA8 1239 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 MORF4L1Q9UBU8 362 aa20.67■□□□□ 0.9
SCAF1-204ENST00000601038 TATDN1Q6P1N9 297 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 TTC6Q86TZ1 520 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 KIF1BPQ96EK5 621 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 P2RX7Q99572 595 aaKnown RBP20.66■□□□□ 0.9
SCAF1-204ENST00000601038 SERPINB13Q9UIV8 391 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 GJD2Q9UKL4 321 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 TAOK2Q9UL54 1235 aa20.66■□□□□ 0.9
SCAF1-204ENST00000601038 MYH1P12882 1939 aa20.65■□□□□ 0.9
SCAF1-204ENST00000601038 H0YGN5 161 aa20.65■□□□□ 0.9
SCAF1-204ENST00000601038 SIRT2Q8IXJ6 389 aa20.65■□□□□ 0.9
SCAF1-204ENST00000601038 DPF3Q92784 378 aa20.65■□□□□ 0.9
SCAF1-204ENST00000601038 RIOK1Q9BRS2 568 aaKnown RBP20.65■□□□□ 0.9
SCAF1-204ENST00000601038 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
SCAF1-204ENST00000601038 GH2P01242 217 aa20.64■□□□□ 0.89
SCAF1-204ENST00000601038 HERVK_113P62684 666 aa20.64■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L2Q6R6M4 530 aa20.64■□□□□ 0.89
SCAF1-204ENST00000601038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.64■□□□□ 0.89
SCAF1-204ENST00000601038 HTATIP2Q9BUP3 242 aa20.64■□□□□ 0.89
SCAF1-204ENST00000601038 CHMP4BQ9H444 224 aaKnown RBP20.64■□□□□ 0.89
SCAF1-204ENST00000601038 PAK6Q9NQU5 681 aaPredicted RBP20.64■□□□□ 0.89
SCAF1-204ENST00000601038 EMILIN3Q9NT22 766 aa20.64■□□□□ 0.89
SCAF1-204ENST00000601038 MAGEB6P1A0A0J9YX57 407 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 APBB1O00213 710 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 RAB11FIP3O75154 756 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 FARP2O94887 1054 aaPredicted RBP20.63■□□□□ 0.89
SCAF1-204ENST00000601038 IFIT2P09913 472 aaKnown RBP20.63■□□□□ 0.89
SCAF1-204ENST00000601038 SLC9C2Q5TAH2 1124 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 GPRC5AQ8NFJ5 357 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 DEFB118Q96PH6 123 aa20.63■□□□□ 0.89
SCAF1-204ENST00000601038 COLQQ9Y215 455 aaPredicted RBP20.63■□□□□ 0.89
SCAF1-204ENST00000601038 TFRCP02786 760 aaKnown RBP20.62■□□□□ 0.89
SCAF1-204ENST00000601038 PDE6AP16499 860 aa20.62■□□□□ 0.89
SCAF1-204ENST00000601038 CERKLQ49MI3 558 aaPredicted RBP20.62■□□□□ 0.89
SCAF1-204ENST00000601038 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
SCAF1-204ENST00000601038 TXNRD2Q9NNW7 524 aa20.62■□□□□ 0.89
SCAF1-204ENST00000601038 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
SCAF1-204ENST00000601038 HMGCRP04035 888 aa20.61■□□□□ 0.89
SCAF1-204ENST00000601038 PLCD1P51178 756 aa20.61■□□□□ 0.89
SCAF1-204ENST00000601038 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
SCAF1-204ENST00000601038 CRISPLD2Q9H0B8 497 aa20.61■□□□□ 0.89
SCAF1-204ENST00000601038 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
SCAF1-204ENST00000601038 GOLIM4O00461 696 aa20.6■□□□□ 0.89
SCAF1-204ENST00000601038 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
SCAF1-204ENST00000601038 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
SCAF1-204ENST00000601038 ABCB5Q2M3G0 1257 aa20.6■□□□□ 0.89
SCAF1-204ENST00000601038 DNAJC2Q99543 621 aaKnown RBP20.6■□□□□ 0.89
SCAF1-204ENST00000601038 CRNKL1Q9BZJ0 848 aaKnown RBP20.6■□□□□ 0.89
SCAF1-204ENST00000601038 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCAF1-204ENST00000601038 CABP5Q9NP86 173 aa20.6■□□□□ 0.89
SCAF1-204ENST00000601038 ZNF532Q9HCE3 1301 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 PEX10O60683 326 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 MAPK4P31152 587 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 SHMT1P34896 483 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 USP14P54578 494 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 ERVK-24P63145 666 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 Q3C1V9 767 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 FEZ1Q99689 392 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 NUDT12Q9BQG2 462 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 KIAA1683Q9H0B3 1180 aa20.59■□□□□ 0.89
SCAF1-204ENST00000601038 RPTORQ8N122 1335 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 TCRBV5S4A2TA0A5A2 114 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L15C9J2P7 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L11C9JVI0 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L18D6R9N7 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L22D6RA61 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L19D6RCP7 530 aa20.58■□□□□ 0.89
SCAF1-204ENST00000601038 USP17L20D6RJB6 530 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms