RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	ATN1	P54259	1190 aa	Predicted RBP	13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	BACE1	P56817	501 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	ERVK-9	P63128	1117 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	ERVK-24	P63145	666 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	MECOM	Q03112	1051 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	CEP126	Q9P2H0	1117 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	ABCF2	Q9UG63	623 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	FBXO3	Q9UK99	471 aa		13.75	□□□□□ -0.21
NUP62-222	ENST00000600935	IGHA2	P01877	340 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	RTP1	P59025	263 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	PDE3A	Q14432	1141 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	SLF2	Q8IX21	1173 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	DNAJC18	Q9H819	358 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	RAPGEFL1	Q9UHV5	662 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	CDK5RAP2	Q96SN8	1893 aa		13.74	□□□□□ -0.21
NUP62-222	ENST00000600935	CNMD	O75829	334 aa		13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	SMAD3	P84022	425 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	PLEKHH3	Q7Z736	793 aa		13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	USP38	Q8NB14	1042 aa		13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	TRPV1	Q8NER1	839 aa		13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	AS3MT	Q9HBK9	375 aa		13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	PA2G4	Q9UQ80	394 aa	Known RBP	13.73	□□□□□ -0.21
NUP62-222	ENST00000600935	PTPRC	P08575	1304 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	FOCAD	Q5VW36	1801 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	DNM1L	O00429	736 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	FOSL2	P15408	326 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	MAP2K5	Q13163	448 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	LPAR1	Q92633	364 aa		13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	SYMPK	Q92797	1274 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	NSUN4	Q96CB9	384 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	DDX20	Q9UHI6	824 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	HERC5	Q9UII4	1024 aa	Known RBP	13.72	□□□□□ -0.21
NUP62-222	ENST00000600935	MAP4K4	O95819	1239 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	IL15	P40933	162 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	TIMM10	P62072	90 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	PI16	Q6UXB8	463 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	METTL16	Q86W50	562 aa	Known RBP	13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	BAD	Q92934	168 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	PAGR1	Q9BTK6	254 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	EMILIN3	Q9NT22	766 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	TMOD4	Q9NZQ9	345 aa		13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP62-222	ENST00000600935	C19orf81	C9J6K1	198 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	ASNS	P08243	561 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	HOXC6	P09630	235 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	SNX17	Q15036	470 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	TJAP1	Q5JTD0	557 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	ERICH6	Q7L0X2	663 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	SH3RF1	Q7Z6J0	888 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	EDC3	Q96F86	508 aa	Known RBP	13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	PDLIM7	Q9NR12	457 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	PRKAG2	Q9UGJ0	569 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	ATP11B	Q9Y2G3	1177 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	NDUFB9	Q9Y6M9	179 aa		13.7	□□□□□ -0.22
NUP62-222	ENST00000600935	TRIM43B	A6NCK2	446 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	USP17L10	C9JJH3	530 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	TNFRSF10A	O00220	468 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	CYBA	P13498	195 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	GJC2	Q5T442	439 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	MFSD14C	Q5VZR4	134 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	SLC39A5	Q6ZMH5	540 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	TBC1D9	Q6ZT07	1266 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	NPLOC4	Q8TAT6	608 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	XAGE2	Q96GT9	111 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	COPRS	Q9NQ92	184 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	HMG20B	Q9P0W2	317 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935	PI4KB	Q9UBF8	816 aa		13.69	□□□□□ -0.22
NUP62-222	ENST00000600935		A0A1B0GUL7	405 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	SLC15A5	A6NIM6	579 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	MSC	O60682	206 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	GDF11	O95390	407 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	PTPRE	P23469	700 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	ITGB8	P26012	769 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	CYP2C19	P33261	490 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	EPHB4	P54760	987 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	GRB14	Q14449	540 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	TRIM60	Q495X7	471 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	TEX11	Q8IYF3	940 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	SSH1	Q8WYL5	1049 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	ZBTB21	Q9ULJ3	1066 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	RABGAP1	Q9Y3P9	1069 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	ZNF236	Q9UL36	1845 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	TRANK1	O15050	2925 aa		13.68	□□□□□ -0.22
NUP62-222	ENST00000600935	ZNF521	Q96K83	1311 aa		13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	TMEM265	A0A087WTH1	108 aa		13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	CNGA1	P29973	690 aa		13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	GRIN2C	Q14957	1233 aa		13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	CCAR1	Q8IX12	1150 aa	Known RBP	13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	C12orf42	Q96LP6	360 aa		13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP62-222	ENST00000600935	LDHC	P07864	332 aa		13.66	□□□□□ -0.22
NUP62-222	ENST00000600935	GSTO1	P78417	241 aa		13.66	□□□□□ -0.22
NUP62-222	ENST00000600935	DHX36	Q9H2U1	1008 aa	Known RBP	13.66	□□□□□ -0.22
NUP62-222	ENST00000600935	BTBD7	Q9P203	1132 aa		13.66	□□□□□ -0.22
NUP62-222	ENST00000600935	FLT1	P17948	1338 aa		13.65	□□□□□ -0.22
NUP62-222	ENST00000600935	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms