RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 JAG1P78504 1218 aa20.29■□□□□ 0.84
NOTCH3-205ENST00000600841 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
NOTCH3-205ENST00000600841 TATDN1Q6P1N9 297 aa20.29■□□□□ 0.84
NOTCH3-205ENST00000600841 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
NOTCH3-205ENST00000600841 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 ERC2O15083 957 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 GNRH1P01148 92 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 CHGBP05060 677 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 RGS19P49795 217 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 SOX10P56693 466 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 MTMR2Q13614 643 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 SHROOM1Q2M3G4 852 aaPredicted RBP20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 TREML2Q5T2D2 321 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 SMCR8Q8TEV9 937 aaPredicted RBP20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 GCC1Q96CN9 775 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 ARHGAP39Q9C0H5 1083 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 PNMA3Q9UL41 463 aa20.28■□□□□ 0.84
NOTCH3-205ENST00000600841 GH2P01242 217 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 BCRP11274 1271 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 BACE1P56817 501 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 PABPC4Q13310 644 aaKnown RBP eCLIP20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 CERKLQ49MI3 558 aaPredicted RBP20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 SH3D19Q5HYK7 790 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 BAZ2AQ9UIF9 1905 aaKnown RBP20.27■□□□□ 0.84
NOTCH3-205ENST00000600841 PRKAB2O43741 272 aa20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 ECM2O94769 699 aaPredicted RBP20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 SHMT1P34896 483 aa20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 PSMC4P43686 418 aa20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 OTUD7AQ8TE49 926 aaPredicted RBP20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 DDRGK1Q96HY6 314 aa20.26■□□□□ 0.83
NOTCH3-205ENST00000600841 C19orf81C9J6K1 198 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 MX1P20591 662 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 OSBPP22059 807 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 GABPAQ06546 454 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 ABCB5Q2M3G0 1257 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 PTCH2Q9Y6C5 1203 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
NOTCH3-205ENST00000600841 RNF113AO15541 343 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 FMNL1O95466 1100 aaPredicted RBP20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 ZFYP08048 801 aaPredicted RBP20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 CYP2D6P10635 497 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 HOXD10P28358 340 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 PRMT2P55345 433 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 MLLT1Q03111 559 aaPredicted RBP20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 RAB3GAP1Q15042 981 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 PI4K2BQ8TCG2 481 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 TRIM47Q96LD4 638 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 MGAMO43451 1857 aa20.24■□□□□ 0.83
NOTCH3-205ENST00000600841 MYH8P13535 1937 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 CTGFP29279 349 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 FCGRTP55899 365 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 EVX2Q03828 476 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 SLC9C1Q4G0N8 1177 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 APPBP2Q92624 585 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 ARMC5Q96C12 935 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
NOTCH3-205ENST00000600841 GCLCP48506 637 aaPredicted RBP20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 USP17L2Q6R6M4 530 aa20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 EXOC6Q8TAG9 804 aa20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 FEZ1Q99689 392 aa20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 ASCC2Q9H1I8 757 aaPredicted RBP20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 RWDD1Q9H446 243 aaPredicted RBP20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 SRRDQ9UH36 339 aa20.22■□□□□ 0.83
NOTCH3-205ENST00000600841 KIAA0100Q14667 2235 aaKnown RBP20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 USP17L21D6R901 530 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 IRX3P78415 501 aaPredicted RBP20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 C12orf60Q5U649 245 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 NBPF11Q86T75 865 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 DYNLL2Q96FJ2 89 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
NOTCH3-205ENST00000600841 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 FAM110CQ1W6H9 321 aa20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 SLC44A5Q8NCS7 719 aa20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 OSBP2Q969R2 916 aa20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 FSD1Q9BTV5 496 aa20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 EMILIN3Q9NT22 766 aa20.2■□□□□ 0.82
NOTCH3-205ENST00000600841 CYP2D7A0A087X1C5 515 aa20.19■□□□□ 0.82
NOTCH3-205ENST00000600841 USP14P54578 494 aa20.19■□□□□ 0.82
NOTCH3-205ENST00000600841 SEPT2Q15019 361 aa20.19■□□□□ 0.82
NOTCH3-205ENST00000600841 RAET1EQ8TD07 263 aa20.19■□□□□ 0.82
NOTCH3-205ENST00000600841 MYPNQ86TC9 1320 aa20.19■□□□□ 0.82
NOTCH3-205ENST00000600841 GPAA1O43292 621 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 GNAT2P19087 354 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 GUCY1A2P33402 732 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms