RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 CTCFP49711 727 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-210ENST00000600286 HAND2P61296 217 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 MAP2K1Q02750 393 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-210ENST00000600286 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 TRDNQ13061 729 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 ABCB5Q2M3G0 1257 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 SCYL3Q8IZE3 742 aa19.79■□□□□ 0.76
USHBP1-210ENST00000600286 ZKSCAN4Q969J2 545 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-210ENST00000600286 SSC5DA1L4H1 1573 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 MYH1P12882 1939 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
USHBP1-210ENST00000600286 SHMT1P34896 483 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 VGLL4Q14135 290 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 NOL9Q5SY16 702 aaKnown RBP19.78■□□□□ 0.76
USHBP1-210ENST00000600286 AKNAD1Q5T1N1 836 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 TBC1D2Q9BYX2 928 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 CNNM2Q9H8M5 875 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
USHBP1-210ENST00000600286 FOCADQ5VW36 1801 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 MAP2K2P36507 400 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 PPP4R3BQ5MIZ7 849 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.77■□□□□ 0.76
USHBP1-210ENST00000600286 ERO1BQ86YB8 467 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 DNAJC18Q9H819 358 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 ELP3Q9H9T3 547 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 AS3MTQ9HBK9 375 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 ROBO3Q96MS0 1386 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 NAV1Q8NEY1 1877 aa19.77■□□□□ 0.76
USHBP1-210ENST00000600286 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 AOC2O75106 756 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 GDF11O95390 407 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 LBX1P52954 281 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 RRP12Q5JTH9 1297 aaKnown RBP19.76■□□□□ 0.75
USHBP1-210ENST00000600286 SLC44A5Q8NCS7 719 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 STAG1Q8WVM7 1258 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 ESR2Q92731 530 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 KRT23Q9C075 422 aa19.76■□□□□ 0.75
USHBP1-210ENST00000600286 TSPY2A6NKD2 308 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 ORC4O43929 436 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 RANBP6O60518 1105 aaKnown RBP19.75■□□□□ 0.75
USHBP1-210ENST00000600286 PRDM1O75626 825 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 GH2P01242 217 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 TSPY3P0CV98 308 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 TSPY8P0CW00 308 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 SLURP2P0DP57 97 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 PPATQ06203 517 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 RAB3GAP1Q15042 981 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 TMEM179Q6ZVK1 233 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
USHBP1-210ENST00000600286 CLMNQ96JQ2 1002 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
USHBP1-210ENST00000600286 CDK5RAP2Q96SN8 1893 aa19.75■□□□□ 0.75
USHBP1-210ENST00000600286 FAM155AB1AL88 458 aaPredicted RBP19.74■□□□□ 0.75
USHBP1-210ENST00000600286 EVX2Q03828 476 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 GRM1Q13255 1194 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 KRT32Q14532 448 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 CREB3L3Q68CJ9 461 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 ZBTB21Q9ULJ3 1066 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 SNCAIPQ9Y6H5 919 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 ZHX2Q9Y6X8 837 aa19.74■□□□□ 0.75
USHBP1-210ENST00000600286 SPDYE5A6NIY4 337 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 CYP21A2P08686 494 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 FGRP09769 529 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
USHBP1-210ENST00000600286 PTPRAP18433 802 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 RASA1P20936 1047 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 TFAP4Q01664 338 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 NECTIN1Q15223 517 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 CCDC178Q5BJE1 867 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 OPTNQ96CV9 577 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 ZIC5Q96T25 663 aa19.73■□□□□ 0.75
USHBP1-210ENST00000600286 BAZ2AQ9UIF9 1905 aaKnown RBP19.72■□□□□ 0.75
USHBP1-210ENST00000600286 SMIM22K7EJ46 135 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 SLC27A2O14975 620 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 AKR1B1P15121 316 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 PPIL2Q13356 520 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 NCOA7Q8NI08 942 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 OTUD5Q96G74 571 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 USP26Q9BXU7 913 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 SH2D4AQ9H788 454 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 KANSL2Q9H9L4 492 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 ARHGEF10LQ9HCE6 1279 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
USHBP1-210ENST00000600286 CASP8AP2Q9UKL3 1982 aa19.72■□□□□ 0.75
USHBP1-210ENST00000600286 E7EWF7 191 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 NOGQ13253 232 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 SPRYD7Q5W111 196 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 TBC1D10CQ8IV04 446 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 NEDD1Q8NHV4 660 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 WNK4Q96J92 1243 aa19.71■□□□□ 0.75
USHBP1-210ENST00000600286 CXCL11O14625 94 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 SLC10A3P09131 477 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 HSPA4P34932 840 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 GTF2A2P52657 109 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 ATP2B2Q01814 1243 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 RRP1BQ14684 758 aaKnown RBP19.7■□□□□ 0.74
USHBP1-210ENST00000600286 SEPT2Q15019 361 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
USHBP1-210ENST00000600286 FAM47AQ5JRC9 791 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms