RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 NR2E3Q9Y5X4 410 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 FPGT-TNNI3KV9GXZ4 949 aa16.77■□□□□ 0.28
IRF3-225ENST00000600022 SIPA1L1O43166 1804 aa16.77■□□□□ 0.27
IRF3-225ENST00000600022 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 ZAP70P43403 619 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 PPP4CP60510 307 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 AAMPQ13685 434 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 Q3C1V9 767 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 COG6Q9Y2V7 657 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 NDUFB9Q9Y6M9 179 aa16.76■□□□□ 0.27
IRF3-225ENST00000600022 FLT1P17948 1338 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
IRF3-225ENST00000600022 DNAH12Q6ZR08 3092 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
IRF3-225ENST00000600022 CYP2B6P20813 491 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
IRF3-225ENST00000600022 BACE1P56817 501 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 TTC39AQ5SRH9 613 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 TRIB2Q92519 343 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 LRCH3Q96II8 777 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 RBPJLQ9UBG7 517 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
IRF3-225ENST00000600022 ATAD5Q96QE3 1844 aa16.75■□□□□ 0.27
IRF3-225ENST00000600022 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
IRF3-225ENST00000600022 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
IRF3-225ENST00000600022 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
IRF3-225ENST00000600022 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
IRF3-225ENST00000600022 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
IRF3-225ENST00000600022 MORF4L1Q9UBU8 362 aa16.74■□□□□ 0.27
IRF3-225ENST00000600022 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
IRF3-225ENST00000600022 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
IRF3-225ENST00000600022 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
IRF3-225ENST00000600022 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 ALPK3Q96L96 1907 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
IRF3-225ENST00000600022 HMGCRP04035 888 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 PORCNQ9H237 461 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
IRF3-225ENST00000600022 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
IRF3-225ENST00000600022 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
IRF3-225ENST00000600022 ZMYND8Q9ULU4 1186 aaPredicted RBP16.73■□□□□ 0.27
IRF3-225ENST00000600022 RPTORQ8N122 1335 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 BAG3O95817 575 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 HOXA7P31268 230 aaPredicted RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 HERVK_113P62684 666 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 PABPC4Q13310 644 aaKnown RBP eCLIP16.72■□□□□ 0.276e-8■■■■□ 22.6
IRF3-225ENST00000600022 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 MIGA1Q8NAN2 632 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 NOL10Q9BSC4 688 aaKnown RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 HMX1Q9NP08 348 aaPredicted RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
IRF3-225ENST00000600022 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
IRF3-225ENST00000600022 ASNSP08243 561 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 SYN1P17600 705 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 CYP7A1P22680 504 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
IRF3-225ENST00000600022 EVX2Q03828 476 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 CCL14Q16627 93 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 B4GALNT3Q6L9W6 998 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
IRF3-225ENST00000600022 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 ZBTB21Q9ULJ3 1066 aa16.71■□□□□ 0.27
IRF3-225ENST00000600022 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 GH2P01242 217 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 MAP3K21Q5TCX8 1036 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 GPRC5AQ8NFJ5 357 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 USP6NLQ92738 828 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 GDF15Q99988 308 aa16.7■□□□□ 0.26
IRF3-225ENST00000600022 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
IRF3-225ENST00000600022 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 CCND3P30281 292 aaPredicted RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 CACNB2Q08289 660 aaPredicted RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 ZNF512BQ96KM6 892 aaPredicted RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
IRF3-225ENST00000600022 OGDHLQ9ULD0 1010 aa16.69■□□□□ 0.26
IRF3-225ENST00000600022 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
IRF3-225ENST00000600022 C19orf81C9J6K1 198 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 CNMDO75829 334 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
IRF3-225ENST00000600022 PLCG2P16885 1265 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 NBPF3Q9H094 633 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 PFASO15067 1338 aa16.68■□□□□ 0.26
IRF3-225ENST00000600022 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 ERVK-24P63145 666 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 MORN1Q5T089 497 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 LHX8Q68G74 356 aa16.67■□□□□ 0.26
IRF3-225ENST00000600022 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms