RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 BACE1P56817 501 aa23.04■■□□□ 1.28
SNRPA-204ENST00000598452 UBE2Q1Q7Z7E8 422 aa23.04■■□□□ 1.28
SNRPA-204ENST00000598452 PCDH10Q9P2E7 1040 aa23.04■■□□□ 1.28
SNRPA-204ENST00000598452 COLQQ9Y215 455 aaPredicted RBP23.04■■□□□ 1.28
SNRPA-204ENST00000598452 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
SNRPA-204ENST00000598452 PEX10O60683 326 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 ERC1Q8IUD2 1116 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 DPF3Q92784 378 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 TMOD4Q9NZQ9 345 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 ZBTB21Q9ULJ3 1066 aa23.03■■□□□ 1.28
SNRPA-204ENST00000598452 SGPL1O95470 568 aa23.02■■□□□ 1.28
SNRPA-204ENST00000598452 USP5P45974 858 aa23.02■■□□□ 1.28
SNRPA-204ENST00000598452 P2RX7Q99572 595 aaKnown RBP23.02■■□□□ 1.28
SNRPA-204ENST00000598452 FOCADQ5VW36 1801 aa23.02■■□□□ 1.28
SNRPA-204ENST00000598452 CDK5RAP2Q96SN8 1893 aa23.02■■□□□ 1.28
SNRPA-204ENST00000598452 IRX3P78415 501 aaPredicted RBP23.01■■□□□ 1.27
SNRPA-204ENST00000598452 MAP3K12Q12852 859 aa23.01■■□□□ 1.27
SNRPA-204ENST00000598452 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
SNRPA-204ENST00000598452 DEFB118Q96PH6 123 aa23.01■■□□□ 1.27
SNRPA-204ENST00000598452 DOCK3Q8IZD9 2030 aa23■■□□□ 1.27
SNRPA-204ENST00000598452 USP17L10C9JJH3 530 aa23■■□□□ 1.27
SNRPA-204ENST00000598452 APBB1O00213 710 aa23■■□□□ 1.27
SNRPA-204ENST00000598452 FARP2O94887 1054 aaPredicted RBP23■■□□□ 1.27
SNRPA-204ENST00000598452 BCL11AQ9H165 835 aa23■■□□□ 1.27
SNRPA-204ENST00000598452 GJD2Q9UKL4 321 aa23■■□□□ 1.27
SNRPA-204ENST00000598452 C19orf81C9J6K1 198 aa22.99■■□□□ 1.27
SNRPA-204ENST00000598452 GH2P01242 217 aa22.99■■□□□ 1.27
SNRPA-204ENST00000598452 HOXA7P31268 230 aaPredicted RBP22.99■■□□□ 1.27
SNRPA-204ENST00000598452 TXNRD2Q9NNW7 524 aa22.99■■□□□ 1.27
SNRPA-204ENST00000598452 GINM1Q9NU53 330 aa22.99■■□□□ 1.27
SNRPA-204ENST00000598452 MORF4L1Q9UBU8 362 aa22.99■■□□□ 1.27
SNRPA-204ENST00000598452 TFRCP02786 760 aaKnown RBP22.98■■□□□ 1.27
SNRPA-204ENST00000598452 HSP90AB4PQ58FF6 505 aa22.98■■□□□ 1.27
SNRPA-204ENST00000598452 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
SNRPA-204ENST00000598452 CERS3Q8IU89 383 aa22.98■■□□□ 1.27
SNRPA-204ENST00000598452 PAK6Q9NQU5 681 aaPredicted RBP22.98■■□□□ 1.27
SNRPA-204ENST00000598452 EMILIN3Q9NT22 766 aa22.98■■□□□ 1.27
SNRPA-204ENST00000598452 COG6Q9Y2V7 657 aa22.98■■□□□ 1.27
SNRPA-204ENST00000598452 MYH1P12882 1939 aa22.98■■□□□ 1.27
SNRPA-204ENST00000598452 FXR1P51114 621 aaKnown RBP eCLIP22.97■■□□□ 1.27
SNRPA-204ENST00000598452 HERVK_113P62684 666 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 TRIM32Q13049 653 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 TATDN1Q6P1N9 297 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 SIRT2Q8IXJ6 389 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 RIOK1Q9BRS2 568 aaKnown RBP22.97■■□□□ 1.27
SNRPA-204ENST00000598452 HTATIP2Q9BUP3 242 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
SNRPA-204ENST00000598452 ZYXQ15942 572 aaKnown RBP22.96■■□□□ 1.27
SNRPA-204ENST00000598452 RBPJLQ9UBG7 517 aa22.96■■□□□ 1.27
SNRPA-204ENST00000598452 HMGCRP04035 888 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 PLCD1P51178 756 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 USP17L2Q6R6M4 530 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 POTEEQ6S8J3 1075 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 CHRDL2Q6WN34 429 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 RPAP2Q8IXW5 612 aaPredicted RBP22.95■■□□□ 1.26
SNRPA-204ENST00000598452 CLASRPQ8N2M8 674 aaKnown RBP22.95■■□□□ 1.26
SNRPA-204ENST00000598452 GPRC5AQ8NFJ5 357 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 KIF1BPQ96EK5 621 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.95■■□□□ 1.26
SNRPA-204ENST00000598452 EHD4Q9H223 541 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 CHMP4BQ9H444 224 aaKnown RBP22.95■■□□□ 1.26
SNRPA-204ENST00000598452 ZBTB40Q9NUA8 1239 aa22.95■■□□□ 1.26
SNRPA-204ENST00000598452 MAGEB6P1A0A0J9YX57 407 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 PDE6AP16499 860 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 CYP2B6P20813 491 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 EVX2Q03828 476 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 RAB3GAP1Q15042 981 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 Q3C1V9 767 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 SLC9C2Q5TAH2 1124 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 TTC6Q86TZ1 520 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 EDC3Q96F86 508 aaKnown RBP22.94■■□□□ 1.26
SNRPA-204ENST00000598452 DNAJC2Q99543 621 aaKnown RBP22.94■■□□□ 1.26
SNRPA-204ENST00000598452 FEZ1Q99689 392 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 PAGR1Q9BTK6 254 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 CRISPLD2Q9H0B8 497 aa22.94■■□□□ 1.26
SNRPA-204ENST00000598452 GOLIM4O00461 696 aa22.93■■□□□ 1.26
SNRPA-204ENST00000598452 SHMT1P34896 483 aa22.93■■□□□ 1.26
SNRPA-204ENST00000598452 TTF1Q15361 905 aaPredicted RBP22.93■■□□□ 1.26
SNRPA-204ENST00000598452 CERKLQ49MI3 558 aaPredicted RBP22.93■■□□□ 1.26
SNRPA-204ENST00000598452 DDX19BQ9UMR2 479 aa22.93■■□□□ 1.26
SNRPA-204ENST00000598452 ZNF532Q9HCE3 1301 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 HMMRO75330 724 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 POLR3DP05423 398 aaPredicted RBP22.92■■□□□ 1.26
SNRPA-204ENST00000598452 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
SNRPA-204ENST00000598452 ABCB5Q2M3G0 1257 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 ACER1Q8TDN7 264 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 TRIB2Q92519 343 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 PAWRQ96IZ0 340 aaKnown RBP22.92■■□□□ 1.26
SNRPA-204ENST00000598452 PORCNQ9H237 461 aa22.92■■□□□ 1.26
SNRPA-204ENST00000598452 ERVK-9P63128 1117 aa22.91■■□□□ 1.26
SNRPA-204ENST00000598452 ERVK-24P63145 666 aa22.91■■□□□ 1.26
SNRPA-204ENST00000598452 DIS3LQ8TF46 1054 aaKnown RBP22.91■■□□□ 1.26
SNRPA-204ENST00000598452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.91■■□□□ 1.26
SNRPA-204ENST00000598452 C12orf42Q96LP6 360 aa22.91■■□□□ 1.26
SNRPA-204ENST00000598452 CEP290O15078 2479 aa22.91■■□□□ 1.26
SNRPA-204ENST00000598452 RPTORQ8N122 1335 aa22.9■■□□□ 1.26
SNRPA-204ENST00000598452 SLFNL1Q499Z3 407 aa22.9■■□□□ 1.26
SNRPA-204ENST00000598452 SDR42E1Q8WUS8 393 aa22.9■■□□□ 1.26
SNRPA-204ENST00000598452 NUDT12Q9BQG2 462 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms