RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 GOLGB1Q14789 3259 aaKnown RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 KIF5CO60282 957 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 RAD51AP2Q09MP3 1159 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 DHX37Q8IY37 1157 aaKnown RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 ZNF444Q8N0Y2 327 aaPredicted RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 OGFRQ9NZT2 677 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 MAGEC2Q9UBF1 373 aaPredicted RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 A0A1W2PQ27 194 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 A0A1W2PQ64 194 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 A0A1W2PQD8 194 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 GSG1L2A8MUP6 293 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 ZPR1O75312 459 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 DEXIO95424 95 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 PTGDRQ13258 359 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 ERFEQ4G0M1 354 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
USHBP1-207ENST00000597928 SRP68Q9UHB9 627 aaKnown RBP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.11□□□□□ -0.15
USHBP1-207ENST00000597928 MPHOSPH10O00566 681 aaKnown RBP14.1□□□□□ -0.15
USHBP1-207ENST00000597928 AXDND1Q5T1B0 1012 aaPredicted RBP14.1□□□□□ -0.15
USHBP1-207ENST00000597928 KIAA1328Q86T90 577 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 NGLY1Q96IV0 654 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 TRIM47Q96LD4 638 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 PPP2R2CQ9Y2T4 447 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 STAT6P42226 847 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 ETF1P62495 437 aaKnown RBP14.1□□□□□ -0.15
USHBP1-207ENST00000597928 UBXN1Q04323 297 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 WWC2Q6AWC2 1192 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 ATL3Q6DD88 541 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 MAPKAPK5Q8IW41 473 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 CCDC87Q9NVE4 849 aa14.1□□□□□ -0.15
USHBP1-207ENST00000597928 LMAN1P49257 510 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 ARID5AQ03989 594 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 PTPROQ16827 1216 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 LETM2Q2VYF4 491 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 FOXP4Q8IVH2 680 aaPredicted RBP14.09□□□□□ -0.15
USHBP1-207ENST00000597928 PP2D1A8MPX8 630 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 ENC1O14682 589 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 DIXDC1Q155Q3 683 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 RILPL1Q5EBL4 403 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 TFR2Q9UP52 801 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 C6orf229H3BNL8 230 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 RIMBP2O15034 1052 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 ZMYND10O75800 440 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 USP17L8P0C7I0 530 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 PRDX5P30044 214 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 UBE3CQ15386 1083 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 TTC38Q5R3I4 469 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 SLC44A5Q8NCS7 719 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 ACRBPQ8NEB7 543 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 UBR1Q8IWV7 1749 aa14.09□□□□□ -0.15
USHBP1-207ENST00000597928 CYP19A1P11511 503 aaPredicted RBP14.08□□□□□ -0.15
USHBP1-207ENST00000597928 TFAP4Q01664 338 aa14.08□□□□□ -0.15
USHBP1-207ENST00000597928 PPP2R3AQ06190 1150 aa14.08□□□□□ -0.15
USHBP1-207ENST00000597928 IGDCC4Q8TDY8 1250 aa14.08□□□□□ -0.15
USHBP1-207ENST00000597928 CDK5RAP3Q96JB5 506 aa14.08□□□□□ -0.15
USHBP1-207ENST00000597928 NCAPD2Q15021 1401 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 LOC102724428A0A0B4J2F2 783 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 GNPATO15228 680 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 KLRK1P26718 216 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 CASP14P31944 242 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 SIK1P57059 783 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 NEK11Q8NG66 645 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 WDR24Q96S15 920 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 DEF6Q9H4E7 631 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 AKR1B15C9JRZ8 316 aaPredicted RBP14.08□□□□□ -0.16
USHBP1-207ENST00000597928 KIF2AO00139 706 aaPredicted RBP14.08□□□□□ -0.16
USHBP1-207ENST00000597928 ZBTB22O15209 634 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 FOXP2O15409 715 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 CCP110O43303 1012 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 MMP1P03956 469 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 RNASE9P60153 205 aaKnown RBP14.08□□□□□ -0.16
USHBP1-207ENST00000597928 BMS1Q14692 1282 aaKnown RBP14.08□□□□□ -0.16
USHBP1-207ENST00000597928 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
USHBP1-207ENST00000597928 SYNRGQ9UMZ2 1314 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 MTIF2P46199 727 aaKnown RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 CRACR2BQ8N4Y2 399 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 TGFBRAP1Q8WUH2 860 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 CELF1Q92879 486 aaKnown RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 A0A0U1RQJ8 604 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 RBL2Q08999 1139 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 ATRIPQ8WXE1 791 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 MACROD2A1Z1Q3 448 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 VEGFAP15692 232 aaPredicted RBP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 RBM5P52756 815 aaKnown RBP eCLIP14.07□□□□□ -0.16
USHBP1-207ENST00000597928 INF2Q27J81 1249 aa14.07□□□□□ -0.16
USHBP1-207ENST00000597928 ADGRA1Q86SQ6 560 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms