RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 PARK7Q99497 189 aaKnown RBP18.6■□□□□ 0.57
XRCC1-206ENST00000597811 FSD1Q9BTV5 496 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
XRCC1-206ENST00000597811 PTCH2Q9Y6C5 1203 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
XRCC1-206ENST00000597811 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 PDE1AP54750 535 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 KIF22Q14807 665 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 SLFNL1Q499Z3 407 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 METTL16Q86W50 562 aaKnown RBP18.59■□□□□ 0.57
XRCC1-206ENST00000597811 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
XRCC1-206ENST00000597811 PI4K2BQ8TCG2 481 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
XRCC1-206ENST00000597811 TCRBV5S4A2TA0A5A2 114 aa18.58■□□□□ 0.56
XRCC1-206ENST00000597811 JAG1P78504 1218 aa18.58■□□□□ 0.56
XRCC1-206ENST00000597811 SPP2Q13103 211 aa18.58■□□□□ 0.56
XRCC1-206ENST00000597811 ARMC5Q96C12 935 aa18.58■□□□□ 0.56
XRCC1-206ENST00000597811 RIOK1Q9BRS2 568 aaKnown RBP18.58■□□□□ 0.56
XRCC1-206ENST00000597811 MYH8P13535 1937 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
XRCC1-206ENST00000597811 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 MBD4O95243 580 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 CHGBP05060 677 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 BCRP11274 1271 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 UBE3CQ15386 1083 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
XRCC1-206ENST00000597811 TREML2Q5T2D2 321 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
XRCC1-206ENST00000597811 LCORLQ8N3X6 602 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 ZNF280CQ8ND82 737 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 AGTPBP1Q9UPW5 1226 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 SLC45A1Q9Y2W3 748 aa18.57■□□□□ 0.56
XRCC1-206ENST00000597811 USP17L5A8MUK1 530 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
XRCC1-206ENST00000597811 POLR3DP05423 398 aaPredicted RBP18.56■□□□□ 0.56
XRCC1-206ENST00000597811 PSMC4P43686 418 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 TRIM47Q96LD4 638 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
XRCC1-206ENST00000597811 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 GDF11O95390 407 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 GNRH1P01148 92 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 ZFYP08048 801 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-206ENST00000597811 HMGCS2P54868 508 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 SLC9C1Q4G0N8 1177 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
XRCC1-206ENST00000597811 SDR42E1Q8WUS8 393 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 ZNF333Q96JL9 665 aa18.55■□□□□ 0.56
XRCC1-206ENST00000597811 ASNSP08243 561 aa18.54■□□□□ 0.56
XRCC1-206ENST00000597811 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
XRCC1-206ENST00000597811 PUS7LQ9H0K6 701 aaKnown RBP18.54■□□□□ 0.56
XRCC1-206ENST00000597811 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
XRCC1-206ENST00000597811 MCM9Q9NXL9 1143 aa18.54■□□□□ 0.56
XRCC1-206ENST00000597811 SLC4A4Q9Y6R1 1079 aa18.54■□□□□ 0.56
XRCC1-206ENST00000597811 FMNL1O95466 1100 aaPredicted RBP18.53■□□□□ 0.56
XRCC1-206ENST00000597811 OSBPP22059 807 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 TTC6Q86TZ1 520 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
XRCC1-206ENST00000597811 SH3TC2Q8TF17 1288 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 APPBP2Q92624 585 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 SRRDQ9UH36 339 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 ZBTB21Q9ULJ3 1066 aa18.53■□□□□ 0.56
XRCC1-206ENST00000597811 PRKAB2O43741 272 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 PRMT2P55345 433 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 MTMR2Q13614 643 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 SH3D19Q5HYK7 790 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 EHD4Q9H223 541 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 SERPINB13Q9UIV8 391 aa18.52■□□□□ 0.56
XRCC1-206ENST00000597811 MYPNQ86TC9 1320 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 APPP05067 770 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 PLCD1P51178 756 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 FCGRTP55899 365 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 BACE1P56817 501 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 TATDN1Q6P1N9 297 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 OSBP2Q969R2 916 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 DCP1AQ9NPI6 582 aaPredicted RBP18.51■□□□□ 0.55
XRCC1-206ENST00000597811 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 PNMA3Q9UL41 463 aa18.51■□□□□ 0.55
XRCC1-206ENST00000597811 GH2P01242 217 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 HOXD10P28358 340 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 EVX2Q03828 476 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 PRKCZQ05513 592 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 ANKRD13CQ8N6S4 541 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 ATP8A2Q9NTI2 1148 aa18.5■□□□□ 0.55
XRCC1-206ENST00000597811 M0R2C6 588 aa18.49■□□□□ 0.55
XRCC1-206ENST00000597811 GPAA1O43292 621 aa18.49■□□□□ 0.55
XRCC1-206ENST00000597811 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
XRCC1-206ENST00000597811 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
XRCC1-206ENST00000597811 ASCC2Q9H1I8 757 aaPredicted RBP18.49■□□□□ 0.55
XRCC1-206ENST00000597811 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 EN2P19622 333 aaPredicted RBP18.48■□□□□ 0.55
XRCC1-206ENST00000597811 SHMT1P34896 483 aa18.48■□□□□ 0.55
XRCC1-206ENST00000597811 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms