RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 ZNF213O14771 459 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 SLC10A3P09131 477 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 FGRP09769 529 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
VRK3-211ENST00000596445 PCP11498 1178 aaKnown RBP9.93□□□□□ -0.82
VRK3-211ENST00000596445 PTPRAP18433 802 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 VEGFBP49765 207 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 HAND2P61296 217 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 PPATQ06203 517 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
VRK3-211ENST00000596445 ABCB5Q2M3G0 1257 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 CYP4F22Q6NT55 531 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 STK11IPQ8N1F8 1099 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 DNAJC5GQ8N7S2 189 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 OPTNQ96CV9 577 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 WNK4Q96J92 1243 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 MKNK2Q9HBH9 465 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
VRK3-211ENST00000596445 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
VRK3-211ENST00000596445 PTPRFP10586 1907 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 GREB1LQ9C091 1923 aaPredicted RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 ORC4O43929 436 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 REC8O95072 547 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 GDF11O95390 407 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 GH2P01242 217 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 RASA1P20936 1047 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 GJA5P36382 358 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 JAG1P78504 1218 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 NOGQ13253 232 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 GRM1Q13255 1194 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 PPIL2Q13356 520 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 SHROOM1Q2M3G4 852 aaPredicted RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 STAG1Q8WVM7 1258 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 OTUD5Q96G74 571 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 TBC1D2Q9BYX2 928 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 NBPF3Q9H094 633 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 CABP5Q9NP86 173 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 ZBTB21Q9ULJ3 1066 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
VRK3-211ENST00000596445 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
VRK3-211ENST00000596445 ZHX2Q9Y6X8 837 aa9.92□□□□□ -0.82
VRK3-211ENST00000596445 MPHOSPH10O00566 681 aaKnown RBP9.91□□□□□ -0.82
VRK3-211ENST00000596445 PRDM1O75626 825 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 MFSD6Q6ZSS7 791 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 TBC1D10CQ8IV04 446 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.91□□□□□ -0.82
VRK3-211ENST00000596445 AFG3L2Q9Y4W6 797 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 TACC3Q9Y6A5 838 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 THSD7BQ9C0I4 1608 aa9.91□□□□□ -0.82
VRK3-211ENST00000596445 CXCL11O14625 94 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 IRF6O14896 467 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 EPB41L2O43491 1005 aaKnown RBP9.9□□□□□ -0.82
VRK3-211ENST00000596445 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
VRK3-211ENST00000596445 AOC2O75106 756 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 CYP21A2P08686 494 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 AKR1B1P15121 316 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 GUCY1A2P33402 732 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 MAP2K2P36507 400 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 NT5C2P49902 561 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 GTF2A2P52657 109 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 MKRN3Q13064 507 aaKnown RBP9.9□□□□□ -0.82
VRK3-211ENST00000596445 SNAPC2Q13487 334 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 SEPT2Q15019 361 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 RAB3GAP1Q15042 981 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 NECTIN1Q15223 517 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
VRK3-211ENST00000596445 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 WDR18Q9BV38 432 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 AS3MTQ9HBK9 375 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 TOMM22Q9NS69 142 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
VRK3-211ENST00000596445 MYH4Q9Y623 1939 aa9.9□□□□□ -0.83
VRK3-211ENST00000596445 PLIN4Q96Q06 1357 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
VRK3-211ENST00000596445 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 SLC27A2O14975 620 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 RANBP6O60518 1105 aaKnown RBP9.89□□□□□ -0.83
VRK3-211ENST00000596445 TSPY3P0CV98 308 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 TSPY8P0CW00 308 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 CETPP11597 493 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 INHBEP58166 350 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 TFAP4Q01664 338 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 KIF23Q02241 960 aaPredicted RBP9.89□□□□□ -0.83
VRK3-211ENST00000596445 SPP2Q13103 211 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 RRP12Q5JTH9 1297 aaKnown RBP9.89□□□□□ -0.83
VRK3-211ENST00000596445 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
VRK3-211ENST00000596445 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms