RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 PARK7Q99497 189 aaKnown RBP15.75■□□□□ 0.11
USE1-207ENST00000596136 ZBTB21Q9ULJ3 1066 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 AGTPBP1Q9UPW5 1226 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 PTPN22Q9Y2R2 807 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
USE1-207ENST00000596136 GLRX3O76003 335 aaKnown RBP15.74■□□□□ 0.11
USE1-207ENST00000596136 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
USE1-207ENST00000596136 SHMT1P34896 483 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 BACE1P56817 501 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 SHROOM1Q2M3G4 852 aaPredicted RBP15.74■□□□□ 0.11
USE1-207ENST00000596136 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 SMC5Q8IY18 1101 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
USE1-207ENST00000596136 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
USE1-207ENST00000596136 C19orf81C9J6K1 198 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 RNF113AO15541 343 aaKnown RBP15.73■□□□□ 0.11
USE1-207ENST00000596136 PRKAB2O43741 272 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 GDF11O95390 407 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 GNRH1P01148 92 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
USE1-207ENST00000596136 CYP2C8P10632 490 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 MX1P20591 662 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 SLC4A8Q2Y0W8 1093 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 ANKRD45Q5TZF3 282 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 EXOC6Q8TAG9 804 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 CPA4Q9UI42 421 aa15.73■□□□□ 0.11
USE1-207ENST00000596136 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
USE1-207ENST00000596136 GH2P01242 217 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 HMGCS2P54868 508 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 CERKLQ49MI3 558 aaPredicted RBP15.72■□□□□ 0.11
USE1-207ENST00000596136 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 APPBP2Q92624 585 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 OSBP2Q969R2 916 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
USE1-207ENST00000596136 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
USE1-207ENST00000596136 CENPFP49454 3210 aa15.72■□□□□ 0.11
USE1-207ENST00000596136 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
USE1-207ENST00000596136 USP17L10C9JJH3 530 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 CTGFP29279 349 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 HOXA7P31268 230 aaPredicted RBP15.71■□□□□ 0.11
USE1-207ENST00000596136 EVX2Q03828 476 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 KIF22Q14807 665 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 C12orf60Q5U649 245 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 ARHGAP39Q9C0H5 1083 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 SWAP70Q9UH65 585 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 PNMA3Q9UL41 463 aa15.71■□□□□ 0.11
USE1-207ENST00000596136 IGHDP01880 384 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 CYP2D6P10635 497 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 PRMT2P55345 433 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 PABPC4Q13310 644 aaKnown RBP eCLIP15.7■□□□□ 0.1
USE1-207ENST00000596136 MTMR2Q13614 643 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 ABCB5Q2M3G0 1257 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 LRRFIP1Q32MZ4 808 aaKnown RBP15.7■□□□□ 0.1
USE1-207ENST00000596136 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
USE1-207ENST00000596136 SLC4A4Q9Y6R1 1079 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 ZSWIM8A7E2V4 1837 aa15.7■□□□□ 0.1
USE1-207ENST00000596136 GSG1L2A8MUP6 293 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 USP17L12C9JPN9 530 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 USP17L21D6R901 530 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 PSMC4P43686 418 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 PDE1AP54750 535 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 SBK1Q52WX2 424 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 ARMC5Q96C12 935 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 TRIM47Q96LD4 638 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 C12orf42Q96LP6 360 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 EMILIN3Q9NT22 766 aa15.69■□□□□ 0.1
USE1-207ENST00000596136 MGAMO43451 1857 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 GCLCP48506 637 aaPredicted RBP15.68■□□□□ 0.1
USE1-207ENST00000596136 CTR9Q6PD62 1173 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 USP17L2Q6R6M4 530 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 ASCC2Q9H1I8 757 aaPredicted RBP15.68■□□□□ 0.1
USE1-207ENST00000596136 TMOD4Q9NZQ9 345 aa15.68■□□□□ 0.1
USE1-207ENST00000596136 KIAA0100Q14667 2235 aaKnown RBP15.67■□□□□ 0.1
USE1-207ENST00000596136 SMIM22K7EJ46 135 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 GPAA1O43292 621 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 GNAT2P19087 354 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 OSBPP22059 807 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 NUCB1Q02818 461 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 FAM110CQ1W6H9 321 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 ZMYM1Q5SVZ6 1142 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 C16orf86Q6ZW13 317 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 SLC44A5Q8NCS7 719 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 SMCR8Q8TEV9 937 aaPredicted RBP15.67■□□□□ 0.1
USE1-207ENST00000596136 DYNLL2Q96FJ2 89 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 CCDC17Q96LX7 622 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 ARPP21Q9UBL0 812 aaPredicted RBP15.67■□□□□ 0.1
USE1-207ENST00000596136 SRRDQ9UH36 339 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 PTCH2Q9Y6C5 1203 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 DOCK3Q8IZD9 2030 aa15.67■□□□□ 0.1
USE1-207ENST00000596136 MYH8P13535 1937 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 CYP2D7A0A087X1C5 515 aa15.66■□□□□ 0.1
USE1-207ENST00000596136 PATL2C9JE40 543 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms