RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 FBXO46Q6PJ61 603 aaPredicted RBP19.03■□□□□ 0.64
ZNF550-207ENST00000595560 PROCA1Q8NCQ7 364 aaPredicted RBP19.03■□□□□ 0.64
ZNF550-207ENST00000595560 WDR18Q9BV38 432 aa19.03■□□□□ 0.64
ZNF550-207ENST00000595560 ZBTB21Q9ULJ3 1066 aa19.03■□□□□ 0.64
ZNF550-207ENST00000595560 TRIM17Q9Y577 477 aa19.03■□□□□ 0.64
ZNF550-207ENST00000595560 CCDC85CA6NKD9 419 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 GDF11O95390 407 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 ZFYP08048 801 aaPredicted RBP19.02■□□□□ 0.64
ZNF550-207ENST00000595560 GABPAQ06546 454 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 C17orf99Q6UX52 265 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 PUS7LQ9H0K6 701 aaKnown RBP19.02■□□□□ 0.64
ZNF550-207ENST00000595560 RWDD1Q9H446 243 aaPredicted RBP19.02■□□□□ 0.64
ZNF550-207ENST00000595560 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 AGTPBP1Q9UPW5 1226 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 HPS5Q9UPZ3 1129 aa19.02■□□□□ 0.64
ZNF550-207ENST00000595560 PRKAB2O43741 272 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 CAP1Q01518 475 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 ARHGEF6Q15052 776 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 SHROOM1Q2M3G4 852 aaPredicted RBP19.01■□□□□ 0.63
ZNF550-207ENST00000595560 LRRFIP1Q32MZ4 808 aaKnown RBP19.01■□□□□ 0.63
ZNF550-207ENST00000595560 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 APPBP2Q92624 585 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 EFCC1Q9HA90 598 aa19.01■□□□□ 0.63
ZNF550-207ENST00000595560 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
ZNF550-207ENST00000595560 CYP2C8P10632 490 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 SHMT1P34896 483 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 HMGCS2P54868 508 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
ZNF550-207ENST00000595560 STAP2Q9UGK3 403 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 CPA4Q9UI42 421 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 MGAMO43451 1857 aa19■□□□□ 0.63
ZNF550-207ENST00000595560 GH2P01242 217 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 BACE1P56817 501 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 EVX2Q03828 476 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 MTMR2Q13614 643 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 CERKLQ49MI3 558 aaPredicted RBP18.99■□□□□ 0.63
ZNF550-207ENST00000595560 TREML2Q5T2D2 321 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 OSBP2Q969R2 916 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 SLC4A4Q9Y6R1 1079 aa18.99■□□□□ 0.63
ZNF550-207ENST00000595560 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 CYP2D6P10635 497 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 BCRP11274 1271 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 PDE1AP54750 535 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 KIF22Q14807 665 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 ABCB5Q2M3G0 1257 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 STRBPQ96SI9 672 aaKnown RBP18.98■□□□□ 0.63
ZNF550-207ENST00000595560 SWAP70Q9UH65 585 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 PNMA3Q9UL41 463 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 PTPN22Q9Y2R2 807 aa18.98■□□□□ 0.63
ZNF550-207ENST00000595560 USP17L10C9JJH3 530 aa18.97■□□□□ 0.63
ZNF550-207ENST00000595560 GNRH1P01148 92 aa18.97■□□□□ 0.63
ZNF550-207ENST00000595560 IGHDP01880 384 aa18.97■□□□□ 0.63
ZNF550-207ENST00000595560 PABPC4Q13310 644 aaKnown RBP eCLIP18.97■□□□□ 0.63
ZNF550-207ENST00000595560 AMOTL1Q8IY63 956 aa18.97■□□□□ 0.63
ZNF550-207ENST00000595560 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
ZNF550-207ENST00000595560 FSD1Q9BTV5 496 aa18.97■□□□□ 0.63
ZNF550-207ENST00000595560 C12orf60Q5U649 245 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 LNPKQ9C0E8 428 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 ARHGAP39Q9C0H5 1083 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 CABP5Q9NP86 173 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 TMOD4Q9NZQ9 345 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 ARPP21Q9UBL0 812 aaPredicted RBP18.96■□□□□ 0.63
ZNF550-207ENST00000595560 CENPFP49454 3210 aa18.96■□□□□ 0.63
ZNF550-207ENST00000595560 USP17L12C9JPN9 530 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 USP17L21D6R901 530 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 GPAA1O43292 621 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 GNAT2P19087 354 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 RAB3GAP1Q15042 981 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 SLC44A5Q8NCS7 719 aa18.95■□□□□ 0.62
ZNF550-207ENST00000595560 CYP2D7A0A087X1C5 515 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 GSG1L2A8MUP6 293 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 M0R2C6 588 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 NUCB1Q02818 461 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 CTR9Q6PD62 1173 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 EVI5LQ96CN4 794 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 DYNLL2Q96FJ2 89 aa18.94■□□□□ 0.62
ZNF550-207ENST00000595560 ASCC2Q9H1I8 757 aaPredicted RBP18.94■□□□□ 0.62
ZNF550-207ENST00000595560 OSBPP22059 807 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 CTGFP29279 349 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 HOXA7P31268 230 aaPredicted RBP18.93■□□□□ 0.62
ZNF550-207ENST00000595560 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 PSMC4P43686 418 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 SBK1Q52WX2 424 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 ZMYM1Q5SVZ6 1142 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 B4GALNT3Q6L9W6 998 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 C16orf86Q6ZW13 317 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 FEZ1Q99689 392 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 KIAA1683Q9H0B3 1180 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 EMILIN3Q9NT22 766 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 RBBP6Q7Z6E9 1792 aaKnown RBP18.93■□□□□ 0.62
ZNF550-207ENST00000595560 ROBO3Q96MS0 1386 aa18.93■□□□□ 0.62
ZNF550-207ENST00000595560 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
ZNF550-207ENST00000595560 SMIM22K7EJ46 135 aa18.92■□□□□ 0.62
ZNF550-207ENST00000595560 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms