RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 IFNAR1P17181 557 aa19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 DIXDC1Q155Q3 683 aa19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 KMT5BQ4FZB7 885 aa19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 ENAHQ8N8S7 591 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 LINC00301Q8NCQ3 95 aa19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 TDRD7Q8NHU6 1098 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 WDR66Q8TBY9 1149 aa19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 ZSCAN10Q96SZ4 725 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-205ENST00000594973 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 CCDC73Q6ZRK6 1079 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 CCDC186Q7Z3E2 898 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 FSIP1Q8NA03 581 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 FANCBQ8NB91 859 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 SEC23AQ15436 765 aa19.63■□□□□ 0.73
SHKBP1-205ENST00000594973 TRIM22Q8IYM9 498 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 POLR3EQ9NVU0 708 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 GGA1Q9UJY5 639 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 MRVI1Q9Y6F6 885 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 CYP2C19P33261 490 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 SNW1Q13573 536 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 NAA30Q147X3 362 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 CEP135Q66GS9 1140 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 IQCA1Q86XH1 822 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 ATP8A2Q9NTI2 1148 aa19.62■□□□□ 0.73
SHKBP1-205ENST00000594973 SPTLC2O15270 562 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 ZNF827Q17R98 1081 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 ANO1Q5XXA6 986 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 KCNG4Q8TDN1 519 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 ERO1AQ96HE7 468 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 STK36Q9NRP7 1315 aa19.61■□□□□ 0.73
SHKBP1-205ENST00000594973 CCDC196A0A1B0GTZ2 297 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 A0A1B0GVL5 298 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 NMT2O60551 498 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 USP17L8P0C7I0 530 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 TPD52L1Q16890 204 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 ANO6Q4KMQ2 910 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 KINO60870 393 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 USP5P45974 858 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 FAM160A1Q05DH4 1040 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 RBM43Q6ZSC3 357 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 CRACR2BQ8N4Y2 399 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 SH3RF3Q8TEJ3 882 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 CD209Q9NNX6 404 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 ARPP21Q9UBL0 812 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 KCNJ14Q9UNX9 436 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 NID2Q14112 1375 aa19.6■□□□□ 0.73
SHKBP1-205ENST00000594973 BBOX1O75936 387 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 YEATS4O95619 227 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 APBA3O96018 575 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 FGRP09769 529 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 ATP2B4P23634 1241 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 ADALQ6DHV7 355 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 PLA2G4DQ86XP0 818 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 MRPS27Q92552 414 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 WASF1Q92558 559 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 POLLQ9UGP5 575 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 C6orf229H3BNL8 230 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 MARCKSP29966 332 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 RBM6P78332 1123 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 CATIPQ7Z7H3 387 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 ENGASEQ8NFI3 743 aa19.59■□□□□ 0.73
SHKBP1-205ENST00000594973 MYH2Q9UKX2 1941 aa19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 LRMPQ12912 555 aa19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 BMS1Q14692 1282 aaKnown RBP19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 LUZP1Q86V48 1076 aa19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.73
SHKBP1-205ENST00000594973 hCG_1642624A0A1W2PR95 340 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 ERICH4A6NGS2 130 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 NEMFO60524 1076 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 PCP11498 1178 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 HOXA10P31260 410 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 ZNF75DP51815 510 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 NDUFA8P51970 172 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 C15orf52Q6ZUT6 534 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 TBC1D16Q8TBP0 767 aa19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 NOL10Q9BSC4 688 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-205ENST00000594973 BTBD18B2RXH4 712 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 DEXIO95424 95 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 RCAN1P53805 252 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 PDE4BQ07343 736 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 COL23A1Q86Y22 540 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 DRC7Q8IY82 874 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 RGS22Q8NE09 1264 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 ERCC4Q92889 916 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 TSPY2A6NKD2 308 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 CDC25BP30305 580 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 GSTO1P78417 241 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 FBXO38Q6PIJ6 1188 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 DNAJC25Q9H1X3 360 aa19.57■□□□□ 0.72
SHKBP1-205ENST00000594973 CCDC88AQ3V6T2 1871 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 ORC4O43929 436 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms