RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NMT2O60551 498 aa17.79■□□□□ 0.44
VRK3-207ENST00000594092 GBP4Q96PP9 640 aa17.79■□□□□ 0.44
VRK3-207ENST00000594092 LLPHQ9BRT6 129 aaKnown RBP17.79■□□□□ 0.44
VRK3-207ENST00000594092 SLC12A7Q9Y666 1083 aa17.79■□□□□ 0.44
VRK3-207ENST00000594092 ZBTB43O43298 467 aa17.78■□□□□ 0.44
VRK3-207ENST00000594092 CTDNEP1O95476 244 aa17.78■□□□□ 0.44
VRK3-207ENST00000594092 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
VRK3-207ENST00000594092 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
VRK3-207ENST00000594092 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
VRK3-207ENST00000594092 EHD4Q9H223 541 aa17.78■□□□□ 0.44
VRK3-207ENST00000594092 TCP10L2B9ZVM9 353 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 WNT10BO00744 389 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 JAK2O60674 1132 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 METAP2P50579 478 aaKnown RBP eCLIP17.77■□□□□ 0.44
VRK3-207ENST00000594092 IFIT1BQ5T764 474 aaKnown RBP17.77■□□□□ 0.44
VRK3-207ENST00000594092 MICU3Q86XE3 530 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 CHMP4CQ96CF2 233 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 SWAP70Q9UH65 585 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 CNOT7Q9UIV1 285 aaKnown RBP17.77■□□□□ 0.44
VRK3-207ENST00000594092 SIPA1L1O43166 1804 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 ATRNL1Q5VV63 1379 aa17.77■□□□□ 0.44
VRK3-207ENST00000594092 COL2A1P02458 1487 aaPredicted RBP17.77■□□□□ 0.43
VRK3-207ENST00000594092 RXRAP19793 462 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 NBPF9Q3BBW0 867 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.43
VRK3-207ENST00000594092 ZNF654Q8IZM8 581 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 TCP11L1Q9NUJ3 509 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.43
VRK3-207ENST00000594092 NID2Q14112 1375 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 EGFRP00533 1210 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 SHMT1P34896 483 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 FKBP1CQ5VVH2 108 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 NEDD1Q8NHV4 660 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 VEZTQ9HBM0 779 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
VRK3-207ENST00000594092 PTPDC1A2A3K4 754 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 MYO1BO43795 1136 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
VRK3-207ENST00000594092 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 SYT1P21579 422 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 MCM4P33991 863 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 RCAN1P53805 252 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 CCDC178Q5BJE1 867 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 GPC2Q8N158 579 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 FAM151AQ8WW52 585 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 DNAJC18Q9H819 358 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 FAM217BQ9NTX9 383 aaPredicted RBP17.75■□□□□ 0.43
VRK3-207ENST00000594092 CNTNAP1P78357 1384 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 BRD1O95696 1058 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 CDC27P30260 824 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
VRK3-207ENST00000594092 RBM26Q5T8P6 1007 aaKnown RBP17.75■□□□□ 0.43
VRK3-207ENST00000594092 SAMD7Q7Z3H4 446 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 DGKHQ86XP1 1220 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
VRK3-207ENST00000594092 HMGN5P82970 282 aaKnown RBP17.74■□□□□ 0.43
VRK3-207ENST00000594092 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
VRK3-207ENST00000594092 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
VRK3-207ENST00000594092 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
VRK3-207ENST00000594092 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
VRK3-207ENST00000594092 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
VRK3-207ENST00000594092 PLIN4Q96Q06 1357 aa17.74■□□□□ 0.43
VRK3-207ENST00000594092 MYH8P13535 1937 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 DDX11L8A8MPP1 907 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 CPLX1O14810 134 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 STX6O43752 255 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 AKR1B1P15121 316 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 TBC1D10BQ4KMP7 808 aaPredicted RBP17.73■□□□□ 0.43
VRK3-207ENST00000594092 C9orf131Q5VYM1 1079 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
VRK3-207ENST00000594092 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
VRK3-207ENST00000594092 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
VRK3-207ENST00000594092 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 TROAPQ12815 778 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 GPR162Q16538 588 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 RTN1Q16799 776 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
VRK3-207ENST00000594092 CLEC17AQ6ZS10 378 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 FAM83AQ86UY5 434 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 GPRC5DQ9NZD1 345 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 H7C1D1 291 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 DDAH1O94760 285 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 PDCP20941 246 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 NTRK3Q16288 839 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 FANCBQ8NB91 859 aa17.72■□□□□ 0.43
VRK3-207ENST00000594092 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
VRK3-207ENST00000594092 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms