RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 USP28Q96RU2 1077 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 ZNF287Q9HBT7 754 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 GJB4Q9NTQ9 266 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 RBM28Q9NW13 759 aaKnown RBP13.86□□□□□ -0.19
NPC1-214ENST00000593280 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
NPC1-214ENST00000593280 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
NPC1-214ENST00000593280 NMT2O60551 498 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 DEXIO95424 95 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
NPC1-214ENST00000593280 PODNQ7Z5L7 613 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 CRACR2BQ8N4Y2 399 aaPredicted RBP13.86□□□□□ -0.19
NPC1-214ENST00000593280 BICD2Q8TD16 824 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
NPC1-214ENST00000593280 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 RCOR1Q9UKL0 485 aa13.86□□□□□ -0.19
NPC1-214ENST00000593280 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 TFAP4Q01664 338 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 CCDC178Q5BJE1 867 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 CC2D2BQ6DHV5 1058 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 PGBD1Q96JS3 809 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
NPC1-214ENST00000593280 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 TSPY26PQ9H489 355 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
NPC1-214ENST00000593280 MYH8P13535 1937 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 ECE2O60344 883 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
NPC1-214ENST00000593280 PLCD1P51178 756 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
NPC1-214ENST00000593280 TROAPQ12815 778 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
NPC1-214ENST00000593280 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 CTCFLQ8NI51 663 aaPredicted RBP13.84□□□□□ -0.19
NPC1-214ENST00000593280 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 PDGFDQ9GZP0 370 aaPredicted RBP13.84□□□□□ -0.19
NPC1-214ENST00000593280 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
NPC1-214ENST00000593280 LIG1P18858 919 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 GUCY1A2P33402 732 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
NPC1-214ENST00000593280 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 DGKHQ86XP1 1220 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
NPC1-214ENST00000593280 CCDC82Q8N4S0 544 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 SLC44A5Q8NCS7 719 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 C7orf43Q8WVR3 580 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 TEKT1Q969V4 418 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 RBSNQ9H1K0 784 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 KAT14Q9H8E8 782 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 DDX19AQ9NUU7 478 aaKnown RBP13.83□□□□□ -0.2
NPC1-214ENST00000593280 POLR3EQ9NVU0 708 aa13.83□□□□□ -0.2
NPC1-214ENST00000593280 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 YEATS4O95619 227 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 RASA1P20936 1047 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 SCNN1DP51172 638 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 FKBP1AP62942 108 aaKnown RBP13.82□□□□□ -0.2
NPC1-214ENST00000593280 STK38Q15208 465 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 HHIPL2Q6UWX4 724 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 TCP11L1Q9NUJ3 509 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 PSME4Q14997 1843 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 PRPF3O43395 683 aaKnown RBP13.82□□□□□ -0.2
NPC1-214ENST00000593280 PLEKHA8P1O95397 391 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 MMP1P03956 469 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.2
NPC1-214ENST00000593280 ME1P48163 572 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 CDK8P49336 464 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 FUT2Q10981 343 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 PICALMQ13492 652 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 KCNG4Q8TDN1 519 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 ANKS1AQ92625 1134 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
NPC1-214ENST00000593280 XBP1P17861 261 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 KIF5BP33176 963 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 AOC3Q16853 763 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 ANO1Q5XXA6 986 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
NPC1-214ENST00000593280 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.81□□□□□ -0.2
NPC1-214ENST00000593280 KCNQ5Q9NR82 932 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
NPC1-214ENST00000593280 USP17L3A6NCW0 530 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms