RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SAP30BPQ9UHR5 308 aaKnown RBP21.43■■□□□ 1.02
RETREG3-212ENST00000593251 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
RETREG3-212ENST00000593251 ASNSP08243 561 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 BACE1P56817 501 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 PPP4CP60510 307 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 DYNLL1P63167 89 aaKnown RBP21.42■■□□□ 1.02
RETREG3-212ENST00000593251 ZKSCAN2Q63HK3 967 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 SSH3Q8TE77 659 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 P2RX7Q99572 595 aaKnown RBP21.42■■□□□ 1.02
RETREG3-212ENST00000593251 TRIM34Q9BYJ4 488 aa21.42■■□□□ 1.02
RETREG3-212ENST00000593251 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
RETREG3-212ENST00000593251 TLR7Q9NYK1 1049 aaKnown RBP21.41■■□□□ 1.02
RETREG3-212ENST00000593251 TMOD4Q9NZQ9 345 aa21.41■■□□□ 1.02
RETREG3-212ENST00000593251 MORF4L1Q9UBU8 362 aa21.41■■□□□ 1.02
RETREG3-212ENST00000593251 CYP2B6P20813 491 aa21.4■■□□□ 1.02
RETREG3-212ENST00000593251 NECAB2Q7Z6G3 386 aa21.4■■□□□ 1.02
RETREG3-212ENST00000593251 FOXP4Q8IVH2 680 aaPredicted RBP21.4■■□□□ 1.02
RETREG3-212ENST00000593251 TRIB2Q92519 343 aa21.4■■□□□ 1.02
RETREG3-212ENST00000593251 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
RETREG3-212ENST00000593251 TXNRD2Q9NNW7 524 aa21.4■■□□□ 1.02
RETREG3-212ENST00000593251 DBNLQ9UJU6 430 aaKnown RBP21.4■■□□□ 1.02
RETREG3-212ENST00000593251 RPTORQ8N122 1335 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 USP17L10C9JJH3 530 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 CAPN2P17655 700 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-212ENST00000593251 HERVK_113P62684 666 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
RETREG3-212ENST00000593251 HMX1Q9NP08 348 aaPredicted RBP21.39■■□□□ 1.01
RETREG3-212ENST00000593251 STAP2Q9UGK3 403 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 ZBTB21Q9ULJ3 1066 aa21.39■■□□□ 1.01
RETREG3-212ENST00000593251 CYP7A1P22680 504 aa21.38■■□□□ 1.01
RETREG3-212ENST00000593251 C7orf61Q8IZ16 206 aa21.38■■□□□ 1.01
RETREG3-212ENST00000593251 NDUFB9Q9Y6M9 179 aa21.38■■□□□ 1.01
RETREG3-212ENST00000593251 C19orf81C9J6K1 198 aa21.37■■□□□ 1.01
RETREG3-212ENST00000593251 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
RETREG3-212ENST00000593251 GPRC5AQ8NFJ5 357 aa21.37■■□□□ 1.01
RETREG3-212ENST00000593251 ZNF512BQ96KM6 892 aaPredicted RBP21.37■■□□□ 1.01
RETREG3-212ENST00000593251 RBPJLQ9UBG7 517 aa21.37■■□□□ 1.01
RETREG3-212ENST00000593251 SOX1O00570 391 aaPredicted RBP21.36■■□□□ 1.01
RETREG3-212ENST00000593251 IDH1O75874 414 aaKnown RBP21.36■■□□□ 1.01
RETREG3-212ENST00000593251 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 MNX1P50219 401 aaPredicted RBP21.36■■□□□ 1.01
RETREG3-212ENST00000593251 Q3C1V9 767 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 ITPRIPQ8IWB1 547 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 ANKLE1Q8NAG6 615 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
RETREG3-212ENST00000593251 NUDT12Q9BQG2 462 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 PAGR1Q9BTK6 254 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 EMILIN3Q9NT22 766 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 ZMYND8Q9ULU4 1186 aaPredicted RBP21.36■■□□□ 1.01
RETREG3-212ENST00000593251 FRMPD3Q5JV73 1810 aa21.36■■□□□ 1.01
RETREG3-212ENST00000593251 RLBP1P12271 317 aa21.35■■□□□ 1.01
RETREG3-212ENST00000593251 PRKAR2AP13861 404 aaKnown RBP21.35■■□□□ 1.01
RETREG3-212ENST00000593251 ZYXQ15942 572 aaKnown RBP21.35■■□□□ 1.01
RETREG3-212ENST00000593251 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
RETREG3-212ENST00000593251 PORCNQ9H237 461 aa21.35■■□□□ 1.01
RETREG3-212ENST00000593251 NOP58Q9Y2X3 529 aaKnown RBP21.35■■□□□ 1.01
RETREG3-212ENST00000593251 NAV1Q8NEY1 1877 aa21.35■■□□□ 1.01
RETREG3-212ENST00000593251 GH2P01242 217 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 USP5P45974 858 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 ERVK-9P63128 1117 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 ERVK-24P63145 666 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 POTEEQ6S8J3 1075 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 MAGEB6Q8N7X4 407 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 LRCH3Q96II8 777 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 NBPF3Q9H094 633 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 GINM1Q9NU53 330 aa21.34■■□□□ 1.01
RETREG3-212ENST00000593251 MAP3K21Q5TCX8 1036 aa21.33■■□□□ 1.01
RETREG3-212ENST00000593251 USP17L2Q6R6M4 530 aa21.33■■□□□ 1.01
RETREG3-212ENST00000593251 C11orf49Q9H6J7 331 aa21.33■■□□□ 1.01
RETREG3-212ENST00000593251 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1.01
RETREG3-212ENST00000593251 LAMA3Q16787 3333 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 A0A1W2PPC1 479 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 SYN1P17600 705 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 MAPK4P31152 587 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 PDE3AQ14432 1141 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 CCL14Q16627 93 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 GPR142Q7Z601 462 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 CCAR1Q8IX12 1150 aaKnown RBP21.32■■□□□ 1
RETREG3-212ENST00000593251 SOCS4Q8WXH5 440 aa21.32■■□□□ 1
RETREG3-212ENST00000593251 XRCC5P13010 732 aaKnown RBP21.31■■□□□ 1
RETREG3-212ENST00000593251 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
RETREG3-212ENST00000593251 CACNB2Q08289 660 aaPredicted RBP21.31■■□□□ 1
RETREG3-212ENST00000593251 USP6NLQ92738 828 aa21.31■■□□□ 1
RETREG3-212ENST00000593251 FEZ1Q99689 392 aa21.31■■□□□ 1
RETREG3-212ENST00000593251 GDF15Q99988 308 aa21.31■■□□□ 1
RETREG3-212ENST00000593251 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
RETREG3-212ENST00000593251 IGSF3O75054 1194 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
RETREG3-212ENST00000593251 RAB3GAP1Q15042 981 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 MORN1Q5T089 497 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 PLEKHH3Q7Z736 793 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 SERPINB13Q9UIV8 391 aa21.3■■□□□ 1
RETREG3-212ENST00000593251 PFASO15067 1338 aa21.29■■□□□ 1
RETREG3-212ENST00000593251 MYH8P13535 1937 aa21.29■■□□□ 1
RETREG3-212ENST00000593251 CNMDO75829 334 aa21.29■■□□□ 1
RETREG3-212ENST00000593251 RGS2P41220 211 aa21.29■■□□□ 1
RETREG3-212ENST00000593251 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms