RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 PACS2Q86VP3 889 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 AFAP1L1Q8TED9 768 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 NEDD4P46934 1319 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 ARHGAP23Q9P227 1491 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
CIRBP-242ENST00000593093 NOP2P46087 812 aaKnown RBP16.15■□□□□ 0.18
CIRBP-242ENST00000593093 CCT5P48643 541 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 GBP3Q9H0R5 595 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 STRN4Q9NRL3 753 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
CIRBP-242ENST00000593093 FXR1P51114 621 aaKnown RBP eCLIP16.15■□□□□ 0.18
CIRBP-242ENST00000593093 ATG9AQ7Z3C6 839 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 PLIN2Q99541 437 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
CIRBP-242ENST00000593093 MMP14P50281 582 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-242ENST00000593093 MINDY4BA8MYZ0 360 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 ZNF174Q15697 407 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 NAPBQ9H115 298 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 SLIT1O75093 1534 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 MACROD2A1Z1Q3 448 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 ERCC3P19447 782 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 NOSTRINQ8IVI9 506 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 CENPHQ9H3R5 247 aa16.14■□□□□ 0.17
CIRBP-242ENST00000593093 ERICH2A1L162 156 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 FAM205CA6NFA0 338 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 PRDM1O75626 825 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 MYO6Q9UM54 1294 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 IPO7O95373 1038 aaKnown RBP16.13■□□□□ 0.17
CIRBP-242ENST00000593093 TDO2P48775 406 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 PTPAQ15257 358 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 APPBP2Q92624 585 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.13■□□□□ 0.174e-7■■■□□ 16.1
CIRBP-242ENST00000593093 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 L1RE1Q9UN81 338 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
CIRBP-242ENST00000593093 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
CIRBP-242ENST00000593093 UBXN1Q04323 297 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 IQSEC3Q9UPP2 1182 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-242ENST00000593093 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
CIRBP-242ENST00000593093 ZEB2O60315 1214 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 PPP6R2O75170 966 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 CCDC122Q5T0U0 273 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 LRRC31Q6UY01 552 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 LDHAL6AQ6ZMR3 332 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 EHD4Q9H223 541 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 ARHGEF25Q86VW2 580 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 ENOX1Q8TC92 643 aaKnown RBP16.12■□□□□ 0.17
CIRBP-242ENST00000593093 GNL3LQ9NVN8 582 aaKnown RBP16.12■□□□□ 0.17
CIRBP-242ENST00000593093 CEP83Q9Y592 693 aa16.12■□□□□ 0.17
CIRBP-242ENST00000593093 SNAP23O00161 211 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
CIRBP-242ENST00000593093 RUFY1Q96T51 708 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 CHP1Q99653 195 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 VPS54Q9P1Q0 977 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 STIM1Q13586 685 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
CIRBP-242ENST00000593093 MAGEA9P43362 315 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
CIRBP-242ENST00000593093 SLC4A8Q2Y0W8 1093 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 PPM1EQ8WY54 764 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
CIRBP-242ENST00000593093 RTN1Q16799 776 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 UTYO14607 1347 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 PLCD1P51178 756 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 MAP2K7O14733 419 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
CIRBP-242ENST00000593093 IFIT5Q13325 482 aaKnown RBP16.1■□□□□ 0.17
CIRBP-242ENST00000593093 NR1I3Q14994 352 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 CNGA4Q8IV77 575 aa16.1■□□□□ 0.17
CIRBP-242ENST00000593093 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 MFAP3LO75121 409 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 ZPR1O75312 459 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 TBX2Q13207 712 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-242ENST00000593093 GGCXP38435 758 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
CIRBP-242ENST00000593093 ZNF185O15231 689 aa16.08■□□□□ 0.17
CIRBP-242ENST00000593093 GUCY2CP25092 1073 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms