RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PCDH10Q9P2E7 1040 aa24.98■■□□□ 1.59
TRIM47-207ENST00000593089 MYH1P12882 1939 aa24.98■■□□□ 1.59
TRIM47-207ENST00000593089 HLA-DOAP06340 250 aa24.97■■□□□ 1.59
TRIM47-207ENST00000593089 BACE1P56817 501 aa24.97■■□□□ 1.59
TRIM47-207ENST00000593089 METTL16Q86W50 562 aaKnown RBP24.97■■□□□ 1.59
TRIM47-207ENST00000593089 U2AF1L4Q8WU68 220 aaKnown RBP24.97■■□□□ 1.59
TRIM47-207ENST00000593089 TMOD4Q9NZQ9 345 aa24.97■■□□□ 1.59
TRIM47-207ENST00000593089 H0YGN5 161 aa24.96■■□□□ 1.59
TRIM47-207ENST00000593089 DPF3Q92784 378 aa24.96■■□□□ 1.59
TRIM47-207ENST00000593089 IL1RAPL2Q9NP60 686 aa24.96■■□□□ 1.59
TRIM47-207ENST00000593089 USP5P45974 858 aa24.95■■□□□ 1.58
TRIM47-207ENST00000593089 IRX3P78415 501 aaPredicted RBP24.95■■□□□ 1.58
TRIM47-207ENST00000593089 ZBTB21Q9ULJ3 1066 aa24.95■■□□□ 1.58
TRIM47-207ENST00000593089 COLQQ9Y215 455 aaPredicted RBP24.95■■□□□ 1.58
TRIM47-207ENST00000593089 SGPL1O95470 568 aa24.94■■□□□ 1.58
TRIM47-207ENST00000593089 MAP3K12Q12852 859 aa24.94■■□□□ 1.58
TRIM47-207ENST00000593089 C19orf81C9J6K1 198 aa24.93■■□□□ 1.58
TRIM47-207ENST00000593089 USP17L10C9JJH3 530 aa24.93■■□□□ 1.58
TRIM47-207ENST00000593089 UBE2Q1Q7Z7E8 422 aa24.93■■□□□ 1.58
TRIM47-207ENST00000593089 GINM1Q9NU53 330 aa24.93■■□□□ 1.58
TRIM47-207ENST00000593089 APBB1O00213 710 aa24.92■■□□□ 1.58
TRIM47-207ENST00000593089 FARP2O94887 1054 aaPredicted RBP24.92■■□□□ 1.58
TRIM47-207ENST00000593089 HSP90AB4PQ58FF6 505 aa24.92■■□□□ 1.58
TRIM47-207ENST00000593089 CERS3Q8IU89 383 aa24.92■■□□□ 1.58
TRIM47-207ENST00000593089 RHPN1Q8TCX5 695 aa24.92■■□□□ 1.58
TRIM47-207ENST00000593089 DEFB118Q96PH6 123 aa24.92■■□□□ 1.58
TRIM47-207ENST00000593089 P2RX7Q99572 595 aaKnown RBP24.92■■□□□ 1.58
TRIM47-207ENST00000593089 PEX10O60683 326 aa24.91■■□□□ 1.58
TRIM47-207ENST00000593089 MS4A1P11836 297 aa24.91■■□□□ 1.58
TRIM47-207ENST00000593089 HOXA7P31268 230 aaPredicted RBP24.91■■□□□ 1.58
TRIM47-207ENST00000593089 HTATIP2Q9BUP3 242 aa24.91■■□□□ 1.58
TRIM47-207ENST00000593089 MORF4L1Q9UBU8 362 aa24.91■■□□□ 1.58
TRIM47-207ENST00000593089 GH2P01242 217 aa24.9■■□□□ 1.58
TRIM47-207ENST00000593089 TFRCP02786 760 aaKnown RBP24.9■■□□□ 1.58
TRIM47-207ENST00000593089 BCL11AQ9H165 835 aa24.9■■□□□ 1.58
TRIM47-207ENST00000593089 HERVK_113P62684 666 aa24.89■■□□□ 1.58
TRIM47-207ENST00000593089 PAK6Q9NQU5 681 aaPredicted RBP24.89■■□□□ 1.58
TRIM47-207ENST00000593089 SERPINB13Q9UIV8 391 aa24.89■■□□□ 1.58
TRIM47-207ENST00000593089 GJD2Q9UKL4 321 aa24.89■■□□□ 1.58
TRIM47-207ENST00000593089 COG6Q9Y2V7 657 aa24.89■■□□□ 1.58
TRIM47-207ENST00000593089 PLXNB2O15031 1838 aa24.89■■□□□ 1.57
TRIM47-207ENST00000593089 TATDN1Q6P1N9 297 aa24.88■■□□□ 1.57
TRIM47-207ENST00000593089 CLASRPQ8N2M8 674 aaKnown RBP24.88■■□□□ 1.57
TRIM47-207ENST00000593089 TXNRD2Q9NNW7 524 aa24.88■■□□□ 1.57
TRIM47-207ENST00000593089 EMILIN3Q9NT22 766 aa24.88■■□□□ 1.57
TRIM47-207ENST00000593089 CEP290O15078 2479 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 HMGCRP04035 888 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 FXR1P51114 621 aaKnown RBP eCLIP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 TTF1Q15361 905 aaPredicted RBP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 ZYXQ15942 572 aaKnown RBP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 TMED8Q6PL24 325 aaPredicted RBP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 USP17L2Q6R6M4 530 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 CHRDL2Q6WN34 429 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 TTC6Q86TZ1 520 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 RPAP2Q8IXW5 612 aaPredicted RBP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 GPRC5AQ8NFJ5 357 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 KIF1BPQ96EK5 621 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 RIOK1Q9BRS2 568 aaKnown RBP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.87■■□□□ 1.57
TRIM47-207ENST00000593089 EHD4Q9H223 541 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 DDX19BQ9UMR2 479 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 NAV1Q8NEY1 1877 aa24.87■■□□□ 1.57
TRIM47-207ENST00000593089 MAGEB6P1A0A0J9YX57 407 aa24.86■■□□□ 1.57
TRIM47-207ENST00000593089 DNAJC2Q99543 621 aaKnown RBP24.86■■□□□ 1.57
TRIM47-207ENST00000593089 FEZ1Q99689 392 aa24.86■■□□□ 1.57
TRIM47-207ENST00000593089 DDX60LQ5H9U9 1706 aaKnown RBP24.86■■□□□ 1.57
TRIM47-207ENST00000593089 HMMRO75330 724 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 IFIT2P09913 472 aaKnown RBP24.85■■□□□ 1.57
TRIM47-207ENST00000593089 CYP2B6P20813 491 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 TRIM32Q13049 653 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 RAB3GAP1Q15042 981 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 CERKLQ49MI3 558 aaPredicted RBP24.85■■□□□ 1.57
TRIM47-207ENST00000593089 SLC9C2Q5TAH2 1124 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 PAGR1Q9BTK6 254 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 RBPJLQ9UBG7 517 aa24.85■■□□□ 1.57
TRIM47-207ENST00000593089 GOLIM4O00461 696 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 PDE6AP16499 860 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 PLCD1P51178 756 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 ABCB5Q2M3G0 1257 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 SIRT2Q8IXJ6 389 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 CRISPLD2Q9H0B8 497 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 ZBTB40Q9NUA8 1239 aa24.84■■□□□ 1.57
TRIM47-207ENST00000593089 POLR3DP05423 398 aaPredicted RBP24.83■■□□□ 1.57
TRIM47-207ENST00000593089 CAPN2P17655 700 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 ERVK-9P63128 1117 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 ERVK-24P63145 666 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 Q3C1V9 767 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 TRIB2Q92519 343 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 CRNKL1Q9BZJ0 848 aaKnown RBP24.83■■□□□ 1.57
TRIM47-207ENST00000593089 NR2E3Q9Y5X4 410 aa24.83■■□□□ 1.57
TRIM47-207ENST00000593089 ZNF532Q9HCE3 1301 aa24.83■■□□□ 1.56
TRIM47-207ENST00000593089 CCAR1Q8IX12 1150 aaKnown RBP24.82■■□□□ 1.56
TRIM47-207ENST00000593089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.82■■□□□ 1.56
TRIM47-207ENST00000593089 PAWRQ96IZ0 340 aaKnown RBP24.82■■□□□ 1.56
TRIM47-207ENST00000593089 NUDT12Q9BQG2 462 aa24.82■■□□□ 1.56
TRIM47-207ENST00000593089 HMX1Q9NP08 348 aaPredicted RBP24.82■■□□□ 1.56
TRIM47-207ENST00000593089 CABP5Q9NP86 173 aa24.82■■□□□ 1.56
TRIM47-207ENST00000593089 RPTORQ8N122 1335 aa24.82■■□□□ 1.56
TRIM47-207ENST00000593089 MAPK4P31152 587 aa24.81■■□□□ 1.56
TRIM47-207ENST00000593089 SHMT1P34896 483 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms