RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ELP3Q9H9T3 547 aa14.21□□□□□ -0.13
DDX39A-219ENST00000592927 SSC5DA1L4H1 1573 aa14.21□□□□□ -0.14
DDX39A-219ENST00000592927 RAD50Q92878 1312 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 GNRH1P01148 92 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 ANP32AP39687 249 aaKnown RBP14.2□□□□□ -0.14
DDX39A-219ENST00000592927 USP5P45974 858 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 TCP10Q12799 353 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-219ENST00000592927 PICALMQ13492 652 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 NBPF12Q5TAG4 269 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-219ENST00000592927 FAM43AQ8N2R8 423 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 LCORLQ8N3X6 602 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 TGFBRAP1Q8WUH2 860 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 C22orf23Q9BZE7 217 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 RNF208Q9H0X6 261 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
DDX39A-219ENST00000592927 CCL15-CCL14A0A0B4J2E2 113 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 M0R2C6 588 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 GPAA1O43292 621 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 ENTPD3O75355 529 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 NPM3O75607 178 aaKnown RBP14.19□□□□□ -0.14
DDX39A-219ENST00000592927 COL9A1P20849 921 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 BMP8BP34820 402 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 CCL15Q16663 113 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 SEC62Q99442 399 aaKnown RBP14.19□□□□□ -0.14
DDX39A-219ENST00000592927 GDF15Q99988 308 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 FAM198AQ9UFP1 575 aa14.19□□□□□ -0.14
DDX39A-219ENST00000592927 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 SGSM2O43147 1006 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 TLR2O60603 784 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 GRK4P32298 578 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 RBM25P49756 843 aaKnown RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 MAPKAPK5Q8IW41 473 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 TMEM39BQ9GZU3 492 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 DDX4Q9NQI0 724 aaKnown RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 BIN2Q9UBW5 565 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-219ENST00000592927 SLC4A4Q9Y6R1 1079 aa14.18□□□□□ -0.14
DDX39A-219ENST00000592927 FLT1P17948 1338 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 GNAT2P19087 354 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 ZFPM1Q8IX07 1006 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 RAET1EQ8TD07 263 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 SDR42E1Q8WUS8 393 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
DDX39A-219ENST00000592927 SRRDQ9UH36 339 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 VCANP13611 3396 aa14.17□□□□□ -0.14
DDX39A-219ENST00000592927 ECM29Q5VYK3 1845 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 PRKAB2O43741 272 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 APPP05067 770 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 GTF2A2P52657 109 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 CCDC129Q6ZRS4 1044 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 ATP8A2Q9NTI2 1148 aa14.16□□□□□ -0.14
DDX39A-219ENST00000592927 RPAP1Q9BWH6 1393 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 SGPL1O95470 568 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 MCCP23508 829 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 CTGFP29279 349 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 KIAA1211Q6ZU35 1233 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 HOOK2Q96ED9 719 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 TRIM47Q96LD4 638 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 TEPSINQ96N21 525 aa14.15□□□□□ -0.14
DDX39A-219ENST00000592927 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 DCP1AQ9NPI6 582 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 SPTBN5Q9NRC6 3674 aaKnown RBP14.15□□□□□ -0.14
DDX39A-219ENST00000592927 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.15
DDX39A-219ENST00000592927 RPTORQ8N122 1335 aa14.15□□□□□ -0.15
DDX39A-219ENST00000592927 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 POLR3DP05423 398 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-219ENST00000592927 OSBPP22059 807 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 PSMC4P43686 418 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 UBXN2AP68543 259 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 GIMAP6Q6P9H5 292 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-219ENST00000592927 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 MCM9Q9NXL9 1143 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
DDX39A-219ENST00000592927 ZMYND8Q9ULU4 1186 aaPredicted RBP14.14□□□□□ -0.15
DDX39A-219ENST00000592927 ATRNL1Q5VV63 1379 aa14.13□□□□□ -0.15
DDX39A-219ENST00000592927 DDTLA6NHG4 134 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-219ENST00000592927 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
DDX39A-219ENST00000592927 HLA-DOAP06340 250 aa14.13□□□□□ -0.15
DDX39A-219ENST00000592927 HOXD10P28358 340 aa14.13□□□□□ -0.15
DDX39A-219ENST00000592927 TDO2P48775 406 aa14.13□□□□□ -0.15
DDX39A-219ENST00000592927 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-219ENST00000592927 TTC6Q86TZ1 520 aa14.13□□□□□ -0.15
DDX39A-219ENST00000592927 AMOTL1Q8IY63 956 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms