RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 LPAR1Q92633 364 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 COPRSQ9NQ92 184 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 PRKAG2Q9UGJ0 569 aa12.55□□□□□ -0.4
SMCO4P1-201ENST00000592909 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 USP17L10C9JJH3 530 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 DNM1LO00429 736 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 SMAD3P84022 425 aaKnown RBP12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 SHHQ15465 462 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 METTL16Q86W50 562 aaKnown RBP12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
SMCO4P1-201ENST00000592909 SPTBN5Q9NRC6 3674 aaKnown RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 HOXC6P09630 235 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 RTP1P59025 263 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 JAG1P78504 1218 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 FOXP4Q8IVH2 680 aaPredicted RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 SSH1Q8WYL5 1049 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 TTYH1Q9H313 450 aaPredicted RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 PA2G4Q9UQ80 394 aaKnown RBP12.53□□□□□ -0.4
SMCO4P1-201ENST00000592909 A0A1B0GUL7 405 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 SLC15A5A6NIM6 579 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 CCNA1P78396 465 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 DNAJC18Q9H819 358 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.41
SMCO4P1-201ENST00000592909 TMEM265A0A087WTH1 108 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 CNMDO75829 334 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 IGHA2P01877 340 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 FOSL2P15408 326 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 PTPREP23469 700 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 SLC39A5Q6ZMH5 540 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 ATP11BQ9Y2G3 1177 aa12.51□□□□□ -0.41
SMCO4P1-201ENST00000592909 COL9A1P20849 921 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 CNGA1P29973 690 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 SNX17Q15036 470 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 ARRDC4Q8NCT1 418 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 BADQ92934 168 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 C12orf42Q96LP6 360 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 ZBTB21Q9ULJ3 1066 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 GDF11O95390 407 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 BAG3O95817 575 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 CYBAP13498 195 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 PLCG2P16885 1265 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 PPP4CP60510 307 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 TFCP2Q12800 502 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 GRB14Q14449 540 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 C1orf53Q5VUE5 145 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 PI16Q6UXB8 463 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 NPLOC4Q8TAT6 608 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
SMCO4P1-201ENST00000592909 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 ARID4AP29374 1257 aaPredicted RBP12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 CYP2C19P33261 490 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 CRACR2BQ8N4Y2 399 aaPredicted RBP12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 TGFBRAP1Q8WUH2 860 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 NEUROD6Q96NK8 337 aa12.48□□□□□ -0.41
SMCO4P1-201ENST00000592909 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms