RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.86□□□□□ -0.51
TPM4-216ENST00000592822 SWAP70Q9UH65 585 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 PCNTO95613 3336 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
TPM4-216ENST00000592822 GDF11O95390 407 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 PTPRAP18433 802 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
TPM4-216ENST00000592822 PTH1RQ03431 593 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 NOGQ13253 232 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 CERKLQ49MI3 558 aaPredicted RBP11.85□□□□□ -0.51
TPM4-216ENST00000592822 CCDC84Q86UT8 332 aaPredicted RBP11.85□□□□□ -0.51
TPM4-216ENST00000592822 PICK1Q9NRD5 415 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 ZBTB21Q9ULJ3 1066 aa11.85□□□□□ -0.51
TPM4-216ENST00000592822 IRF6O14896 467 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 GH2P01242 217 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 ASNSP08243 561 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 ZBTB48P10074 688 aaPredicted RBP11.84□□□□□ -0.51
TPM4-216ENST00000592822 RASA1P20936 1047 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 MAP2K2P36507 400 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 PPATQ06203 517 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 PPIL2Q13356 520 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 ABCB5Q2M3G0 1257 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
TPM4-216ENST00000592822 AKR1B1P15121 316 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 HAND2P61296 217 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 MS4A4AQ96JQ5 239 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 LSG1Q9H089 658 aaKnown RBP11.83□□□□□ -0.52
TPM4-216ENST00000592822 GINM1Q9NU53 330 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
TPM4-216ENST00000592822 AFG3L2Q9Y4W6 797 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 ZHX2Q9Y6X8 837 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 PTPRFP10586 1907 aa11.83□□□□□ -0.52
TPM4-216ENST00000592822 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
TPM4-216ENST00000592822 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 PRDM1O75626 825 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
TPM4-216ENST00000592822 FGRP09769 529 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 CASC1Q6TDU7 716 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 TBC1D10CQ8IV04 446 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 CCDC17Q96LX7 622 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
TPM4-216ENST00000592822 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 CTNNA3Q9UI47 895 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 KCNH4Q9UQ05 1017 aa11.82□□□□□ -0.52
TPM4-216ENST00000592822 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
TPM4-216ENST00000592822 MANSC4A6NHS7 340 aaPredicted RBP11.81□□□□□ -0.52
TPM4-216ENST00000592822 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
TPM4-216ENST00000592822 ZNF213O14771 459 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 ORC4O43929 436 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 TM4SF4P48230 202 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 GTF2A2P52657 109 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 PDE4BQ07343 736 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 SPP2Q13103 211 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 MOGSQ13724 837 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 SEPT2Q15019 361 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 TMEM179Q6ZVK1 233 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 ZNF444Q8N0Y2 327 aaPredicted RBP11.81□□□□□ -0.52
TPM4-216ENST00000592822 ZNF280CQ8ND82 737 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 BRI3BPQ8WY22 251 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 WDR18Q9BV38 432 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 ZNF287Q9HBT7 754 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 CABP5Q9NP86 173 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
TPM4-216ENST00000592822 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
TPM4-216ENST00000592822 CXCL11O14625 94 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 IMMTQ16891 758 aaKnown RBP11.8□□□□□ -0.52
TPM4-216ENST00000592822 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 CLEC10AQ8IUN9 316 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 REM2Q8IYK8 340 aaPredicted RBP11.8□□□□□ -0.52
TPM4-216ENST00000592822 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 PTPN18Q99952 460 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 TBC1D2Q9BYX2 928 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 AS3MTQ9HBK9 375 aa11.8□□□□□ -0.52
TPM4-216ENST00000592822 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
TPM4-216ENST00000592822 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 A0A0G2JLL6 359 aaPredicted RBP11.79□□□□□ -0.52
TPM4-216ENST00000592822 IGF2BP3O00425 579 aaKnown RBP eCLIP11.79□□□□□ -0.52
TPM4-216ENST00000592822 CYP21A2P08686 494 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
TPM4-216ENST00000592822 CETPP11597 493 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 INHBEP58166 350 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 TFAP4Q01664 338 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 CCL15Q16663 113 aa11.79□□□□□ -0.52
TPM4-216ENST00000592822 MFSD6Q6ZSS7 791 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms