RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 SMG8Q8ND04 991 aaKnown RBP9.15□□□□□ -0.94
VMP1-215ENST00000592619 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 YARSP54577 528 aaKnown RBP9.14□□□□□ -0.95
VMP1-215ENST00000592619 MTERF2Q49AM1 385 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 NUTM2GQ5VZR2 741 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 KIAA1211Q6ZU35 1233 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 HID1Q8IV36 788 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 WHAMMQ8TF30 809 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 RNF208Q9H0X6 261 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 ATXN3LQ9H3M9 355 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 CYP4F12Q9HCS2 524 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 PICK1Q9NRD5 415 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 TJP2Q9UDY2 1190 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 KLHL3Q9UH77 587 aa9.14□□□□□ -0.95
VMP1-215ENST00000592619 RAG1P15918 1043 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 CAP2P40123 477 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 AKAP4Q5JQC9 854 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 MRM1Q6IN84 353 aaKnown RBP9.13□□□□□ -0.95
VMP1-215ENST00000592619 VHLLQ6RSH7 139 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 KCT2Q8NC54 265 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 TMEM87BQ96K49 555 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 GSX1Q9H4S2 264 aaPredicted RBP9.13□□□□□ -0.95
VMP1-215ENST00000592619 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
VMP1-215ENST00000592619 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
VMP1-215ENST00000592619 NACADO15069 1562 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 B2RBV5 119 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 WISP1O95388 367 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 ANKRD13AQ8IZ07 590 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 FAM13CQ8NE31 585 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 THAP3Q8WTV1 239 aaPredicted RBP9.12□□□□□ -0.95
VMP1-215ENST00000592619 APPBP2Q92624 585 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
VMP1-215ENST00000592619 EPN3Q9H201 632 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 KANSL2Q9H9L4 492 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 TMEM260Q9NX78 707 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
VMP1-215ENST00000592619 RB1CC1Q8TDY2 1594 aa9.12□□□□□ -0.95
VMP1-215ENST00000592619 MYO15BQ96JP2 1530 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 PPM1GO15355 546 aaPredicted RBP9.11□□□□□ -0.95
VMP1-215ENST00000592619 CDC45O75419 566 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 ADH5P11766 374 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
VMP1-215ENST00000592619 C2orf27AQ580R0 203 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 ZNF385CQ66K41 422 aaPredicted RBP9.11□□□□□ -0.95
VMP1-215ENST00000592619 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 DHRS1Q96LJ7 313 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 TMX1Q9H3N1 280 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
VMP1-215ENST00000592619 PIK3R2O00459 728 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 RGS13O14921 159 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 TIAF1O95411 115 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 SLC7A5Q01650 507 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 BBS9Q3SYG4 887 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 ACAD11Q709F0 780 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
VMP1-215ENST00000592619 TMEM130Q8N3G9 435 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 KLHL6Q8WZ60 621 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
VMP1-215ENST00000592619 GNB5O14775 395 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 ELNP15502 786 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
VMP1-215ENST00000592619 TTLL4Q14679 1199 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 FBRSQ9HAH7 460 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 AP4E1Q9UPM8 1137 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
VMP1-215ENST00000592619 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 ESYT3A0FGR9 886 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 NEFMP07197 916 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
VMP1-215ENST00000592619 SQSTM1Q13501 440 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 SLBPQ14493 270 aaKnown RBP eCLIP9.08□□□□□ -0.96
VMP1-215ENST00000592619 KIAA1211LQ6NV74 962 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 KIAA0907Q7Z7F0 614 aaPredicted RBP9.08□□□□□ -0.96
VMP1-215ENST00000592619 CCDC74BQ96LY2 380 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 PCDHB10Q9UN67 800 aa9.08□□□□□ -0.96
VMP1-215ENST00000592619 DIAPH1O60610 1272 aaKnown RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 ARHGEF15O94989 841 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 GDF11O95390 407 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 CST3P01034 146 aaPredicted RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 POLR2BP30876 1174 aaKnown RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 ZNF143P52747 638 aaPredicted RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 PMS1P54277 932 aaKnown RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
VMP1-215ENST00000592619 NKG7Q16617 165 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 LONRF2Q1L5Z9 754 aa9.07□□□□□ -0.96
VMP1-215ENST00000592619 GNPTABQ3T906 1256 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms