RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 USP6NLQ92738 828 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 FERMT2Q96AC1 680 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 CDCA7LQ96GN5 454 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 TXNRD2Q9NNW7 524 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 MORF4L1Q9UBU8 362 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 UTYO14607 1347 aa9.26□□□□□ -0.93
VAT1-209ENST00000592388 PRR33A8MZF0 331 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 KBTBD13C9JR72 458 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 PI4K2BG5E9Z4 385 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 HMGCS2P54868 508 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 SPP2Q13103 211 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 UBE4AQ14139 1066 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 SNX17Q15036 470 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 RABL6Q3YEC7 729 aaPredicted RBP9.25□□□□□ -0.93
VAT1-209ENST00000592388 MFSD14CQ5VZR4 134 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 ANO1Q5XXA6 986 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 FBXL18Q96ME1 805 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 APBA2Q99767 749 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 PORCNQ9H237 461 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 FLRT1Q9NZU1 646 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 TACC3Q9Y6A5 838 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 FRMPD3Q5JV73 1810 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 CDK5RAP2Q96SN8 1893 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 MAST3O60307 1309 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 RLFQ13129 1914 aa9.25□□□□□ -0.93
VAT1-209ENST00000592388 ATRNL1Q5VV63 1379 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 PLXNA1Q9UIW2 1896 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 E9PSI1 815 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 ERC2O15083 957 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 MSCO60682 206 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 CTNND1O60716 968 aaKnown RBP9.24□□□□□ -0.93
VAT1-209ENST00000592388 CLTBP09497 229 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 MAPK4P31152 587 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 ADCYAP1R1P41586 468 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 SLFN5Q08AF3 891 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 Q3C1V9 767 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 MORN1Q5T089 497 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 FBXO33Q7Z6M2 555 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 ZSCAN29Q8IWY8 852 aaPredicted RBP9.24□□□□□ -0.93
VAT1-209ENST00000592388 VGLL2Q8N8G2 317 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 ARRDC4Q8NCT1 418 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.24□□□□□ -0.93
VAT1-209ENST00000592388 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
VAT1-209ENST00000592388 USP40Q9NVE5 1235 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 PTPRCP08575 1304 aa9.24□□□□□ -0.93
VAT1-209ENST00000592388 TLL1O43897 1013 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 CYP2C19P33261 490 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 IRX3P78415 501 aaPredicted RBP9.23□□□□□ -0.93
VAT1-209ENST00000592388 METTL24Q5JXM2 366 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 PLEKHH3Q7Z736 793 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 TRPV1Q8NER1 839 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 EDC3Q96F86 508 aaKnown RBP9.23□□□□□ -0.93
VAT1-209ENST00000592388 USP44Q9H0E7 712 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 CD320Q9NPF0 282 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 TMEM39AQ9NV64 488 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 MSRAQ9UJ68 235 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 PHIPQ8WWQ0 1821 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 MROH5Q6ZUA9 1318 aa9.23□□□□□ -0.93
VAT1-209ENST00000592388 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 PQBP1O60828 265 aaKnown RBP9.22□□□□□ -0.93
VAT1-209ENST00000592388 RGS3P49796 1198 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 MAP2K5Q13163 448 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 SH3BP5LQ7L8J4 393 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 HERVK_113Q902F9 699 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 PAGR1Q9BTK6 254 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 SMC4Q9NTJ3 1288 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 RBPJLQ9UBG7 517 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 SUGT1Q9Y2Z0 365 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 ZDBF2Q9HCK1 2354 aa9.22□□□□□ -0.93
VAT1-209ENST00000592388 DOCK1Q14185 1865 aa9.21□□□□□ -0.93
VAT1-209ENST00000592388 WDFY4Q6ZS81 3184 aa9.21□□□□□ -0.93
VAT1-209ENST00000592388 DDTLA6NHG4 134 aaPredicted RBP9.21□□□□□ -0.94
VAT1-209ENST00000592388 RFX5P48382 616 aaPredicted RBP9.21□□□□□ -0.94
VAT1-209ENST00000592388 HERVK_113P62684 666 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 ERVK-24P63145 666 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 CAVIN4Q5BKX8 364 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 WDR78Q5VTH9 848 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 SLC28A3Q9HAS3 691 aa9.21□□□□□ -0.94
VAT1-209ENST00000592388 PRRC2BQ5JSZ5 2229 aaKnown RBP9.21□□□□□ -0.94
VAT1-209ENST00000592388 REV3LO60673 3130 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 FAM196BA6NMK8 535 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 ST18O60284 1047 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 PDE8BO95263 885 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 ACRP10323 421 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 FOXK2Q01167 660 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 RAB30Q15771 203 aa9.2□□□□□ -0.94
VAT1-209ENST00000592388 TMEM240Q5SV17 173 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms