RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 CRACR2BQ8N4Y2 399 aaPredicted RBP11.27□□□□□ -0.61
APOC1-207ENST00000592176 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
APOC1-207ENST00000592176 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
APOC1-207ENST00000592176 GINM1Q9NU53 330 aa11.27□□□□□ -0.61
APOC1-207ENST00000592176 COL6A1P12109 1028 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 RGS2P41220 211 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 MCAMP43121 646 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 PPP4CP60510 307 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 ERVK-24P63145 666 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 LHX8Q68G74 356 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
APOC1-207ENST00000592176 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 USP6NLQ92738 828 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 PAGR1Q9BTK6 254 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 CWC22Q9HCG8 908 aaKnown RBP11.26□□□□□ -0.61
APOC1-207ENST00000592176 AATFQ9NY61 560 aaKnown RBP eCLIP11.26□□□□□ -0.61
APOC1-207ENST00000592176 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 PFASO15067 1338 aa11.26□□□□□ -0.61
APOC1-207ENST00000592176 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
APOC1-207ENST00000592176 GDF11O95390 407 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
APOC1-207ENST00000592176 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
APOC1-207ENST00000592176 CCL14Q16627 93 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 MORN1Q5T089 497 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 GPR142Q7Z601 462 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 GTF3C2Q8WUA4 911 aaPredicted RBP11.25□□□□□ -0.61
APOC1-207ENST00000592176 EDC3Q96F86 508 aaKnown RBP11.25□□□□□ -0.61
APOC1-207ENST00000592176 PORCNQ9H237 461 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
APOC1-207ENST00000592176 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
APOC1-207ENST00000592176 GNAI2P04899 355 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 RARSP54136 660 aaKnown RBP11.24□□□□□ -0.61
APOC1-207ENST00000592176 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 TTC39AQ5SRH9 613 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
APOC1-207ENST00000592176 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 SAP30BPQ9UHR5 308 aaKnown RBP11.24□□□□□ -0.61
APOC1-207ENST00000592176 MYH13Q9UKX3 1938 aa11.24□□□□□ -0.61
APOC1-207ENST00000592176 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
APOC1-207ENST00000592176 HLA-DOAP06340 250 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 CCNA1P78396 465 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 SHROOM1Q2M3G4 852 aaPredicted RBP11.23□□□□□ -0.61
APOC1-207ENST00000592176 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
APOC1-207ENST00000592176 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
APOC1-207ENST00000592176 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 GH2P01242 217 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 CYP2E1P05181 493 aaPredicted RBP11.22□□□□□ -0.61
APOC1-207ENST00000592176 FLT1P17948 1338 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 CNGA1P29973 690 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 ATP2B2Q01814 1243 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 FAM109BQ6ICB4 259 aaPredicted RBP11.22□□□□□ -0.61
APOC1-207ENST00000592176 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 DOCK3Q8IZD9 2030 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 APBA2Q99767 749 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 NDUFB9Q9Y6M9 179 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 A0A0C4DFX4 3053 aa11.22□□□□□ -0.61
APOC1-207ENST00000592176 SLC15A5A6NIM6 579 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 IGSF3O75054 1194 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 CYP7A1P22680 504 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 PTPREP23469 700 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
APOC1-207ENST00000592176 ZYXQ15942 572 aaKnown RBP11.21□□□□□ -0.61
APOC1-207ENST00000592176 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 FEZ1Q99689 392 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 PRKAG2Q9UGJ0 569 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
APOC1-207ENST00000592176 COL6A3P12111 3177 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 PTPRFP10586 1907 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 MSCO60682 206 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 CNMDO75829 334 aa11.2□□□□□ -0.62
APOC1-207ENST00000592176 ZAP70P43403 619 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms