RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 MCATQ8IVS2 390 aaKnown RBP5.62□□□□□ -1.51
VMP1-212ENST00000591782 MRPL41Q8IXM3 137 aaKnown RBP5.62□□□□□ -1.51
VMP1-212ENST00000591782 TOP6BLQ8N6T0 577 aa5.62□□□□□ -1.51
VMP1-212ENST00000591782 TMEM87BQ96K49 555 aa5.62□□□□□ -1.51
VMP1-212ENST00000591782 FOXQ1Q9C009 403 aa5.62□□□□□ -1.51
VMP1-212ENST00000591782 KLHL3Q9UH77 587 aa5.62□□□□□ -1.51
VMP1-212ENST00000591782 UPK3BL1B0FP48 263 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 UPK3BL2E5RIL1 263 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 ATE1O95260 518 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 ZNF165P49910 485 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 SLC6A19Q695T7 634 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 OGFOD3Q6PK18 319 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 SLC51AQ86UW1 340 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 REXO1Q8N1G1 1221 aaKnown RBP5.61□□□□□ -1.51
VMP1-212ENST00000591782 FAM13CQ8NE31 585 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 RASGRP4Q8TDF6 673 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 XAGE3Q8WTP9 111 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 DUSP23Q9BVJ7 150 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 CAPN10Q9HC96 672 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 PRDM10Q9NQV6 1147 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 GINM1Q9NU53 330 aa5.61□□□□□ -1.51
VMP1-212ENST00000591782 PRR19A6NJB7 356 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 CHURC1-FNTBB4DL54 471 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 SLITRK5O94991 958 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
VMP1-212ENST00000591782 MFSD2AQ8NA29 543 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 GIMAP7Q8NHV1 300 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 MIPEPQ99797 713 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 OSBPL1AQ9BXW6 950 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 ATG3Q9NT62 314 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 PPT2Q9UMR5 302 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 EFR3BQ9Y2G0 817 aa5.6□□□□□ -1.51
VMP1-212ENST00000591782 TGFB1P01137 390 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 SOX9P48436 509 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 RIN3Q8TB24 985 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 SPATA32Q96LK8 384 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 TINF2Q9BSI4 451 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 ANTXR1Q9H6X2 564 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 ZNRF3Q9ULT6 936 aa5.59□□□□□ -1.51
VMP1-212ENST00000591782 SLC22A31A6NKX4 558 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 NASPP49321 788 aaPredicted RBP5.58□□□□□ -1.52
VMP1-212ENST00000591782 YARSP54577 528 aaKnown RBP5.58□□□□□ -1.52
VMP1-212ENST00000591782 CYP27A1Q02318 531 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 MLECQ14165 292 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 DUSP27Q5VZP5 1158 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 OVOS1Q6IE37 1185 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 LETMD1Q6P1Q0 360 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 FERD3LQ96RJ6 166 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
VMP1-212ENST00000591782 GMIPQ9P107 970 aa5.58□□□□□ -1.52
VMP1-212ENST00000591782 RBAK-RBAKDNI3L0D1 243 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 EOMESO95936 686 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 ZC3H6P61129 1189 aaKnown RBP5.57□□□□□ -1.52
VMP1-212ENST00000591782 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
VMP1-212ENST00000591782 COL9A2Q14055 689 aaPredicted RBP5.57□□□□□ -1.52
VMP1-212ENST00000591782 CYP27C1Q4G0S4 372 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 ARSHQ5FYA8 562 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 FBXW10Q5XX13 1052 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 FAM214BQ7L5A3 538 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 HEXIM2Q96MH2 286 aaKnown RBP5.57□□□□□ -1.52
VMP1-212ENST00000591782 LRRC4CQ9HCJ2 640 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 PIM2Q9P1W9 311 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 LEMD3Q9Y2U8 911 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 U3KQE9 123 aa5.57□□□□□ -1.52
VMP1-212ENST00000591782 CNTNAP4Q9C0A0 1308 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 MEIS3P2A8K0S8 358 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 CYP26A1O43174 497 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 IMPDH2P12268 514 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 ATF4P18848 351 aaPredicted RBP5.56□□□□□ -1.52
VMP1-212ENST00000591782 HOXA10P31260 410 aaPredicted RBP5.56□□□□□ -1.52
VMP1-212ENST00000591782 CPSF6Q16630 551 aaKnown RBP eCLIP5.56□□□□□ -1.52
VMP1-212ENST00000591782 NLRC3Q7RTR2 1065 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 CDH24Q86UP0 819 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 PHACTR4Q8IZ21 702 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 FAM181AQ8N9Y4 354 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 BAHD1Q8TBE0 780 aaPredicted RBP5.56□□□□□ -1.52
VMP1-212ENST00000591782 PPP1R13LQ8WUF5 828 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 ATG4CQ96DT6 458 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 SEC16BQ96JE7 1060 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 TPX2Q9ULW0 747 aaKnown RBP5.56□□□□□ -1.52
VMP1-212ENST00000591782 RNF112Q9ULX5 631 aa5.56□□□□□ -1.52
VMP1-212ENST00000591782 FOSL1P15407 271 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 RAG1P15918 1043 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
VMP1-212ENST00000591782 DNAJA1P31689 397 aaKnown RBP5.55□□□□□ -1.52
VMP1-212ENST00000591782 LRRFIP1Q32MZ4 808 aaKnown RBP5.55□□□□□ -1.52
VMP1-212ENST00000591782 NAALADL2Q58DX5 795 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 CDCP2Q5VXM1 449 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 DNAJB8Q8NHS0 232 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 KIF2CQ99661 725 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
VMP1-212ENST00000591782 PRDM5Q9NQX1 630 aaPredicted RBP5.55□□□□□ -1.52
VMP1-212ENST00000591782 NME1P15531 152 aaKnown RBP5.54□□□□□ -1.52
VMP1-212ENST00000591782 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms