RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PODNQ7Z5L7 613 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 RNF135Q8IUD6 432 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 FAM160A2Q8N612 972 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 PLPP7Q8NBV4 271 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 FAM200AQ8TCP9 573 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 OTUD7AQ8TE49 926 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 TSR3Q9UJK0 312 aaKnown RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 PCDHB9Q9Y5E1 797 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 MYO3BQ8WXR4 1341 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 GLTPD2A6NH11 291 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 DXOO77932 396 aaKnown RBP7.79□□□□□ -1.16
VPS4B-205ENST00000591383 UQCRFS1P1P0C7P4 283 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 MCAMP43121 646 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 SCARF1Q14162 830 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 STRIP1Q5VSL9 837 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 TTLL5Q6EMB2 1281 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 KIAA0825Q8IV33 1275 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 SMC5Q8IY18 1101 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 TDRD7Q8NHU6 1098 aaKnown RBP7.79□□□□□ -1.16
VPS4B-205ENST00000591383 CLP1Q92989 425 aaKnown RBP7.79□□□□□ -1.16
VPS4B-205ENST00000591383 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 NMRK2Q9NPI5 230 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 MYH2Q9UKX2 1941 aa7.79□□□□□ -1.16
VPS4B-205ENST00000591383 FAM205AQ6ZU69 1335 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 POTEB3A0JP26 581 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 IQCA1LA6NCM1 817 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 GOLGA8CPA6NN73 597 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 MX1P20591 662 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 RPS12P25398 132 aaKnown RBP7.78□□□□□ -1.16
VPS4B-205ENST00000591383 SCNN1DP51172 638 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 MMP16P51512 607 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 NUCB1Q02818 461 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 EAPPQ56P03 285 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-205ENST00000591383 POTEBQ6S5H4 581 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 CENPQQ7L2Z9 268 aaPredicted RBP7.78□□□□□ -1.16
VPS4B-205ENST00000591383 CHD1LQ86WJ1 897 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 DZIP1Q86YF9 867 aaKnown RBP7.78□□□□□ -1.16
VPS4B-205ENST00000591383 ANKMY2Q8IV38 441 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 CERS5Q8N5B7 392 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 SPATA5Q8NB90 893 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 WDR66Q8TBY9 1149 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 TBC1D22AQ8WUA7 517 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 ECHDC1Q9NTX5 307 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 GPRC5DQ9NZD1 345 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 HMG20BQ9P0W2 317 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 ABCF2Q9UG63 623 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 HACL1Q9UJ83 578 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 MAST3O60307 1309 aa7.78□□□□□ -1.16
VPS4B-205ENST00000591383 PDS5AQ29RF7 1337 aaKnown RBP7.78□□□□□ -1.16
VPS4B-205ENST00000591383 NAV1Q8NEY1 1877 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 GOLIM4O00461 696 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 LDHBP07195 334 aaKnown RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 VIL1P09327 827 aaKnown RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 PRDX5P30044 214 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 ZAP70P43403 619 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 RBM5P52756 815 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 LSM11P83369 360 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 KIF4BQ2VIQ3 1234 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 TSGA10IPQ3SY00 556 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 TBC1D10BQ4KMP7 808 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 TRAF7Q6Q0C0 670 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 C16orf71Q8IYS4 520 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 ZNF784Q8NCA9 323 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 AGBL3Q8NEM8 1001 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 ADAM32Q8TC27 787 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 TRPM4Q8TD43 1214 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 SPSB2Q99619 263 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 RAI14Q9P0K7 980 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 HDAC9Q9UKV0 1011 aa7.77□□□□□ -1.17
VPS4B-205ENST00000591383 TTF2Q9UNY4 1162 aaKnown RBP7.77□□□□□ -1.17
VPS4B-205ENST00000591383 H7C1D1 291 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 ERC2O15083 957 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 IDH1O75874 414 aaKnown RBP7.76□□□□□ -1.17
VPS4B-205ENST00000591383 MAP4K4O95819 1239 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-205ENST00000591383 EPHX2P34913 555 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 EPS15P42566 896 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 DPYDQ12882 1025 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 GRIK5Q16478 980 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 EML3Q32P44 896 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 ZGPATQ8N5A5 531 aaKnown RBP7.76□□□□□ -1.17
VPS4B-205ENST00000591383 EDC3Q96F86 508 aaKnown RBP7.76□□□□□ -1.17
VPS4B-205ENST00000591383 HS3ST6Q96QI5 342 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 BOLA2Q9H3K6 86 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 PRDM9Q9NQV7 894 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 LRP2BPQ9P2M1 347 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 CNOT7Q9UIV1 285 aaKnown RBP7.76□□□□□ -1.17
VPS4B-205ENST00000591383 TTC41PQ6P2S7 1318 aa7.76□□□□□ -1.17
VPS4B-205ENST00000591383 EGFRP00533 1210 aa7.75□□□□□ -1.17
VPS4B-205ENST00000591383 VEGFAP15692 232 aaPredicted RBP7.75□□□□□ -1.17
VPS4B-205ENST00000591383 ATP5JP18859 108 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms