RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 CCP110O43303 1012 aa23.88■■□□□ 1.41
ZNF554-203ENST00000590116 CCDC152Q4G0S7 254 aa23.88■■□□□ 1.41
ZNF554-203ENST00000590116 CCDC93Q567U6 631 aa23.88■■□□□ 1.41
ZNF554-203ENST00000590116 TMTC2Q8N394 836 aa23.88■■□□□ 1.41
ZNF554-203ENST00000590116 CSRNP2Q9H175 543 aa23.88■■□□□ 1.41
ZNF554-203ENST00000590116 RNF41Q9H4P4 317 aaPredicted RBP23.88■■□□□ 1.41
ZNF554-203ENST00000590116 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
ZNF554-203ENST00000590116 EARS2Q5JPH6 523 aaKnown RBP23.87■■□□□ 1.41
ZNF554-203ENST00000590116 ELOA2Q8IYF1 753 aaPredicted RBP23.87■■□□□ 1.41
ZNF554-203ENST00000590116 MED15Q96RN5 788 aa23.87■■□□□ 1.41
ZNF554-203ENST00000590116 TMEM139Q8IV31 216 aa23.87■■□□□ 1.41
ZNF554-203ENST00000590116 SMARCE1Q969G3 411 aa23.87■■□□□ 1.41
ZNF554-203ENST00000590116 TUBB4AP04350 444 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 CASP1P29466 404 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 GYG1P46976 350 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 TRIM65Q6PJ69 517 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 MORC2Q9Y6X9 1032 aaPredicted RBP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 PHLPP1O60346 1717 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 MYH2Q9UKX2 1941 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 CDK11BP21127 795 aaKnown RBP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 ADKP55263 362 aaKnown RBP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 REXO1L1PQ8IX06 675 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 SAMSN1Q9NSI8 373 aaKnown RBP23.86■■□□□ 1.41
ZNF554-203ENST00000590116 CCDC87Q9NVE4 849 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 ZNF446Q9NWS9 450 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 RAI14Q9P0K7 980 aa23.86■■□□□ 1.41
ZNF554-203ENST00000590116 BAZ2AQ9UIF9 1905 aaKnown RBP23.85■■□□□ 1.41
ZNF554-203ENST00000590116 CICQ96RK0 1608 aaPredicted RBP23.85■■□□□ 1.41
ZNF554-203ENST00000590116 WNT7AO00755 349 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 ACTN4O43707 911 aaKnown RBP23.85■■□□□ 1.41
ZNF554-203ENST00000590116 ATP6V1AP38606 617 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 NT5DC1Q5TFE4 455 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 SRPRBQ9Y5M8 271 aaKnown RBP23.85■■□□□ 1.41
ZNF554-203ENST00000590116 A0A087X0B3 334 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 CAMTA2O94983 1202 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 EVX2Q03828 476 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 NOM1Q5C9Z4 860 aaKnown RBP23.85■■□□□ 1.41
ZNF554-203ENST00000590116 MLKLQ8NB16 471 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 TAF1P21675 1872 aa23.85■■□□□ 1.41
ZNF554-203ENST00000590116 PHLPP2Q6ZVD8 1323 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 COL1A1P02452 1464 aaPredicted RBP23.84■■□□□ 1.41
ZNF554-203ENST00000590116 SARSP49591 514 aaKnown RBP23.84■■□□□ 1.41
ZNF554-203ENST00000590116 DYNLL1P63167 89 aaKnown RBP23.84■■□□□ 1.41
ZNF554-203ENST00000590116 MORC3Q14149 939 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 ZNF579Q8NAF0 562 aaKnown RBP23.84■■□□□ 1.41
ZNF554-203ENST00000590116 DHX58Q96C10 678 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 CEP131Q9UPN4 1083 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 PLEKHA8P1O95397 391 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 NTSR2O95665 410 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 SEC23AQ15436 765 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 EPSTI1Q96J88 318 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 MTA3Q9BTC8 594 aa23.84■■□□□ 1.41
ZNF554-203ENST00000590116 RCAN1P53805 252 aa23.83■■□□□ 1.41
ZNF554-203ENST00000590116 ESR2Q92731 530 aa23.83■■□□□ 1.41
ZNF554-203ENST00000590116 DACH1Q9UI36 760 aa23.83■■□□□ 1.41
ZNF554-203ENST00000590116 MAGEB6P1A0A0J9YX57 407 aa23.83■■□□□ 1.4
ZNF554-203ENST00000590116 ZNF18P17022 549 aa23.83■■□□□ 1.4
ZNF554-203ENST00000590116 AFMP43652 599 aa23.83■■□□□ 1.4
ZNF554-203ENST00000590116 AKAP17AQ02040 695 aaKnown RBP23.83■■□□□ 1.4
ZNF554-203ENST00000590116 ITPK1Q13572 414 aa23.83■■□□□ 1.4
ZNF554-203ENST00000590116 TOGARAM2Q6ZUX3 1019 aa23.83■■□□□ 1.4
ZNF554-203ENST00000590116 ENAHQ8N8S7 591 aaPredicted RBP23.83■■□□□ 1.4
ZNF554-203ENST00000590116 VWA3AA6NCI4 1184 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 ARHGAP6O43182 974 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 URI1O94763 535 aaPredicted RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 C3orf67Q6ZVT6 689 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 ENOX1Q8TC92 643 aaKnown RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 ST7Q9NRC1 585 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 PPP2R2CQ9Y2T4 447 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 TBX2Q13207 712 aaPredicted RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 PKN1Q16512 942 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 PARP10Q53GL7 1025 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 KLHL10Q6JEL2 608 aa23.82■■□□□ 1.4
ZNF554-203ENST00000590116 BAG1Q99933 345 aaPredicted RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 RNF26Q9BY78 433 aaPredicted RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 MYH14Q7Z406 1995 aaKnown RBP23.82■■□□□ 1.4
ZNF554-203ENST00000590116 BAZ2BQ9UIF8 2168 aaKnown RBP23.81■■□□□ 1.4
ZNF554-203ENST00000590116 ZSCAN12O43309 604 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 ARHGAP29Q52LW3 1261 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 SPECC1LQ69YQ0 1117 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 TC2NQ8N9U0 490 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 RTL9Q8NET4 1388 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 STX17P56962 302 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 FCHSD1Q86WN1 690 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 KRT222Q8N1A0 295 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 DESI2Q9BSY9 194 aa23.81■■□□□ 1.4
ZNF554-203ENST00000590116 KANK3Q6NY19 840 aa23.8■■□□□ 1.4
ZNF554-203ENST00000590116 SMYD4Q8IYR2 804 aaPredicted RBP23.8■■□□□ 1.4
ZNF554-203ENST00000590116 TRIML1Q8N9V2 468 aa23.8■■□□□ 1.4
ZNF554-203ENST00000590116 TRIM75PA6NK02 468 aa23.79■■□□□ 1.4
ZNF554-203ENST00000590116 NUTM2AQ8IVF1 878 aaPredicted RBP23.79■■□□□ 1.4
ZNF554-203ENST00000590116 V9GY48 417 aaPredicted RBP23.79■■□□□ 1.4
ZNF554-203ENST00000590116 H2AFXP16104 143 aaPredicted RBP23.79■■□□□ 1.4
ZNF554-203ENST00000590116 XBP1P17861 261 aa23.79■■□□□ 1.4
ZNF554-203ENST00000590116 WDR24Q96S15 920 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms