RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 CRACR2BQ8N4Y2 399 aaPredicted RBP11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 OPTNQ96CV9 577 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 SLC10A4Q96EP9 437 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZIC5Q96T25 663 aa11.18□□□□□ -0.62
HMGN1P31-201ENST00000590085 HSPD1P10809 573 aaKnown RBP11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 CAP2P40123 477 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 TDO2P48775 406 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 JAG1P78504 1218 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 PPIL2Q13356 520 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 ALX1Q15699 326 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 SHROOM1Q2M3G4 852 aaPredicted RBP11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 C16orf86Q6ZW13 317 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 AMOTL1Q8IY63 956 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 A0A0G2JMZ2 1700 aa11.17□□□□□ -0.62
HMGN1P31-201ENST00000590085 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 CASP8AP2Q9UKL3 1982 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 APPP05067 770 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 PTPRAP18433 802 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 PPATQ06203 517 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 DYNLL2Q96FJ2 89 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 NACAP1Q9BZK3 213 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 NAPBQ9H115 298 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZBTB21Q9ULJ3 1066 aa11.16□□□□□ -0.62
HMGN1P31-201ENST00000590085 ZSWIM8A7E2V4 1837 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 SGSM2O43147 1006 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 GDF11O95390 407 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 ASNSP08243 561 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 MKRN3Q13064 507 aaKnown RBP11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 KCNH4Q9UQ05 1017 aa11.15□□□□□ -0.62
HMGN1P31-201ENST00000590085 HTTP42858 3142 aa11.15□□□□□ -0.63
HMGN1P31-201ENST00000590085 PLIN4Q96Q06 1357 aa11.15□□□□□ -0.63
HMGN1P31-201ENST00000590085 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 MINDY4BA8MYZ0 360 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 IRF6O14896 467 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 FGAP02671 866 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 CDK8P49336 464 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 PPARAQ07869 468 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 CERKLQ49MI3 558 aaPredicted RBP11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 RUFY2Q8WXA3 655 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 DSCC1Q9BVC3 393 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 AFG3L2Q9Y4W6 797 aa11.14□□□□□ -0.63
HMGN1P31-201ENST00000590085 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 GH2P01242 217 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 RASA1P20936 1047 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 TM4SF4P48230 202 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 GTF2A2P52657 109 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 SREBF2Q12772 1141 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 MOGSQ13724 837 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 ABCB5Q2M3G0 1257 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 WDR18Q9BV38 432 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 ZHX2Q9Y6X8 837 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 MYH6P13533 1939 aa11.13□□□□□ -0.63
HMGN1P31-201ENST00000590085 A0A0G2JLL6 359 aaPredicted RBP11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 CXCL11O14625 94 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 CDC45O75419 566 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 AKR1B1P15121 316 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 SNAPC2Q13487 334 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 PRRT2Q7Z6L0 340 aaPredicted RBP11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 PTPN18Q99952 460 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
HMGN1P31-201ENST00000590085 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 FGRP09769 529 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 CETPP11597 493 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 INHBEP58166 350 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 PTH1RQ03431 593 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 SEPT2Q15019 361 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 CCL15Q16663 113 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 TMEM179Q6ZVK1 233 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 TBC1D10CQ8IV04 446 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 SAGE1Q9NXZ1 904 aa11.11□□□□□ -0.63
HMGN1P31-201ENST00000590085 CENPFP49454 3210 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms